RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 AKR1B1P15121 316 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 NFIAQ12857 509 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 HEATR3Q7Z4Q2 680 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 CCDC148Q8NFR7 591 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 FERMT2Q96AC1 680 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 CPVLQ9H3G5 476 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 TTC12Q9H892 705 aaPredicted RBP20.8■□□□□ 0.92
ACTN4-202ENST00000390009 BARHL2Q9NY43 387 aa20.8■□□□□ 0.92
ACTN4-202ENST00000390009 MYO3BQ8WXR4 1341 aa20.79■□□□□ 0.92
ACTN4-202ENST00000390009 USP49Q70CQ1 688 aa20.79■□□□□ 0.92
ACTN4-202ENST00000390009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.79■□□□□ 0.92
ACTN4-202ENST00000390009 GREB1LQ9C091 1923 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 IGKV6D-41A0A0C4DH26 115 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 HLA-DOAP06340 250 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 ATP2C1P98194 919 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 HDLBPQ00341 1268 aaKnown RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 PDGFDQ9GZP0 370 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 HOOK1Q9UJC3 728 aaKnown RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 PCDHAC2Q9Y5I4 1007 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 SIPA1L1O43166 1804 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 STXBP3O00186 592 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 SHMT1P34896 483 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 MDM2Q00987 491 aaPredicted RBP20.78■□□□□ 0.92
ACTN4-202ENST00000390009 KIAA2012Q0VF49 1180 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 PTGDRQ13258 359 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 ISM2Q6H9L7 571 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 MYH4Q9Y623 1939 aa20.78■□□□□ 0.92
ACTN4-202ENST00000390009 GOLGB1Q14789 3259 aaKnown RBP20.77■□□□□ 0.92
ACTN4-202ENST00000390009 M0R2N6 131 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 FOXN1O15353 648 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 SMARCA1P28370 1054 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 GALNT17Q6IS24 598 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 FOXP4Q8IVH2 680 aaPredicted RBP20.77■□□□□ 0.92
ACTN4-202ENST00000390009 PDILTQ8N807 584 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 DAGLBQ8NCG7 672 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 SERTAD1Q9UHV2 236 aa20.77■□□□□ 0.92
ACTN4-202ENST00000390009 USP17L5A8MUK1 530 aa20.77■□□□□ 0.91
ACTN4-202ENST00000390009 TPM3P06753 285 aa20.77■□□□□ 0.91
ACTN4-202ENST00000390009 PDHBP11177 359 aa20.77■□□□□ 0.91
ACTN4-202ENST00000390009 RBM5P52756 815 aaKnown RBP eCLIP20.77■□□□□ 0.912e-6■■■□□ 15
ACTN4-202ENST00000390009 FAM177A1Q8N128 213 aaPredicted RBP20.77■□□□□ 0.91
ACTN4-202ENST00000390009 RASGRP4Q8TDF6 673 aa20.77■□□□□ 0.91
ACTN4-202ENST00000390009 PCDHA5Q9Y5H7 936 aa20.77■□□□□ 0.91
ACTN4-202ENST00000390009 MCM7P33993 719 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 POSTNQ15063 836 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 ZFPM1Q8IX07 1006 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 DRC7Q8IY82 874 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 LRRC47Q8N1G4 583 aaKnown RBP20.76■□□□□ 0.91
ACTN4-202ENST00000390009 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 EPSTI1Q96J88 318 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 EHD4Q9H223 541 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 C10orf71Q711Q0 1435 aa20.76■□□□□ 0.91
ACTN4-202ENST00000390009 ACTN4O43707 911 aaKnown RBP20.75■□□□□ 0.91
ACTN4-202ENST00000390009 C21orf2O43822 256 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 CDC25BP30305 580 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 CACNB3P54284 484 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 EIF6P56537 245 aaKnown RBP20.75■□□□□ 0.91
ACTN4-202ENST00000390009 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 CLEC10AQ8IUN9 316 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 RRP36Q96EU6 259 aaKnown RBP20.75■□□□□ 0.91
ACTN4-202ENST00000390009 PCDHA6Q9UN73 950 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 PCDHA8Q9Y5H6 950 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 PSME4Q14997 1843 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 TTLL1O95922 423 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 SYMPKQ92797 1274 aaKnown RBP20.75■□□□□ 0.91
ACTN4-202ENST00000390009 SERPINA10Q9UK55 444 aa20.75■□□□□ 0.91
ACTN4-202ENST00000390009 CCDC194A0A1B0GVG4 234 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 VWA3AA6NCI4 1184 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 TCP10Q12799 353 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 KANK3Q6NY19 840 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 MRFAP1L1Q96HT8 127 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 IDI2Q9BXS1 227 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 CLIP2Q9UDT6 1046 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 SEC63Q9UGP8 760 aaKnown RBP20.74■□□□□ 0.91
ACTN4-202ENST00000390009 A0A087X0B3 334 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 BAG6P46379 1132 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 NAPAP54920 295 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 CCDC12Q8WUD4 166 aaPredicted RBP20.74■□□□□ 0.91
ACTN4-202ENST00000390009 ZMYND12Q9H0C1 365 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 DHX36Q9H2U1 1008 aaKnown RBP20.74■□□□□ 0.91
ACTN4-202ENST00000390009 KCNF1Q9H3M0 494 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
ACTN4-202ENST00000390009 FRMPD2Q68DX3 1309 aaPredicted RBP20.73■□□□□ 0.91
ACTN4-202ENST00000390009 PRR29P0C7W0 189 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 SNHG28P0DPA3 235 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 SF3B2Q13435 895 aaKnown RBP20.73■□□□□ 0.91
ACTN4-202ENST00000390009 ASPRV1Q53RT3 343 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 PIGSQ96S52 555 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 RIOX1Q9H6W3 641 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 FAM198AQ9UFP1 575 aa20.73■□□□□ 0.91
ACTN4-202ENST00000390009 YDJCA8MPS7 323 aa20.72■□□□□ 0.91
ACTN4-202ENST00000390009 SMTNL1A8MU46 457 aa20.72■□□□□ 0.91
ACTN4-202ENST00000390009 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
ACTN4-202ENST00000390009 SLURP2P0DP57 97 aa20.72■□□□□ 0.91
ACTN4-202ENST00000390009 NCAPHQ15003 741 aa20.72■□□□□ 0.91
ACTN4-202ENST00000390009 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms