RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 TOX2Q96NM4 488 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 MMP19Q99542 508 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 TINF2Q9BSI4 451 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 SWAP70Q9UH65 585 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 TNFRSF10AO00220 468 aa25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 TMEM132BQ14DG7 1078 aa25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 TTF1Q15361 905 aaPredicted RBP25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 TSEN34Q9BSV6 310 aaKnown RBP25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 VCPKMTQ9H867 229 aa25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 TMX2Q9Y320 296 aa25.87■■□□□ 1.73
CNEP1R1-201ENST00000389134 WDR46O15213 610 aaKnown RBP25.86■■□□□ 1.73
CNEP1R1-201ENST00000389134 ZKSCAN2Q63HK3 967 aa25.86■■□□□ 1.73
CNEP1R1-201ENST00000389134 ANKRD33Q7Z3H0 272 aa25.86■■□□□ 1.73
CNEP1R1-201ENST00000389134 SPICE1Q8N0Z3 855 aa25.86■■□□□ 1.73
CNEP1R1-201ENST00000389134 ZNF576Q9H609 170 aa25.86■■□□□ 1.73
CNEP1R1-201ENST00000389134 DCDC2CA8MYV0 355 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 AKR1A1P14550 325 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 EVX2Q03828 476 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 SAMD1Q6SPF0 538 aaPredicted RBP25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 USP38Q8NB14 1042 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 C1orf115Q9H7X2 142 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 ADAMTS5Q9UNA0 930 aa25.85■■□□□ 1.73
CNEP1R1-201ENST00000389134 ICA1Q05084 483 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 FAAP100Q0VG06 881 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 KCTD2Q14681 263 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 ZNF792Q3KQV3 632 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 SLC9C2Q5TAH2 1124 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 RIOX2Q8IUF8 465 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 SIAH1Q8IUQ4 282 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 SLC44A5Q8NCS7 719 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 NUP133Q8WUM0 1156 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 TIFAQ96CG3 184 aa25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 DCP1AQ9NPI6 582 aaPredicted RBP25.84■■□□□ 1.73
CNEP1R1-201ENST00000389134 PGK2P07205 417 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 ZNF865P0CJ78 1059 aaPredicted RBP25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 PDE6AP16499 860 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 COL9A1P20849 921 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 AACSQ86V21 672 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 SDR42E1Q8WUS8 393 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 STARD7Q9NQZ5 370 aa25.83■■□□□ 1.73
CNEP1R1-201ENST00000389134 MCM3APO60318 1980 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 BDP1A6H8Y1 2624 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 ADAMTS4O75173 837 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 TIMP1P01033 207 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 TAL1P17542 331 aaPredicted RBP25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 COPB2P35606 906 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 ERC1Q8IUD2 1116 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 CCDC17Q96LX7 622 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 CNPY2Q9Y2B0 182 aa25.82■■□□□ 1.72
CNEP1R1-201ENST00000389134 CHD9Q3L8U1 2897 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 MOXD2PA6NHM9 499 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 AKR1B1P15121 316 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 STAT3P40763 770 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 ACLYP53396 1101 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 CCDC174Q6PII3 467 aa25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 GAS2L1Q99501 681 aaPredicted RBP25.81■■□□□ 1.72
CNEP1R1-201ENST00000389134 CYP2D6P10635 497 aa25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 CLEC10AQ8IUN9 316 aa25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 MSL3Q8N5Y2 521 aaKnown RBP25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 ATXN2LQ8WWM7 1075 aaKnown RBP25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 DYNLL2Q96FJ2 89 aa25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 ZNF532Q9HCE3 1301 aa25.8■■□□□ 1.72
CNEP1R1-201ENST00000389134 VWA5AO00534 786 aa25.79■■□□□ 1.72
CNEP1R1-201ENST00000389134 PPIGQ13427 754 aaKnown RBP eCLIP25.79■■□□□ 1.72
CNEP1R1-201ENST00000389134 MFSD5Q6N075 450 aa25.79■■□□□ 1.72
CNEP1R1-201ENST00000389134 KLHDC9Q8NEP7 349 aa25.79■■□□□ 1.72
CNEP1R1-201ENST00000389134 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.79■■□□□ 1.727e-7■■□□□ 13.4
CNEP1R1-201ENST00000389134 MROH7Q68CQ1 1323 aa25.79■■□□□ 1.72
CNEP1R1-201ENST00000389134 AKNAD1Q5T1N1 836 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 LCORLQ8N3X6 602 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 LENG1Q96BZ8 264 aaPredicted RBP25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 FBXO28Q9NVF7 368 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 TBX21Q9UL17 535 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 FAM184BQ9ULE4 1060 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 PPP1R9AQ9ULJ8 1098 aa25.78■■□□□ 1.72
CNEP1R1-201ENST00000389134 TCRBV5S4A2TA0A5A2 114 aa25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 KCNA10Q16322 511 aa25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 ATP8A2Q9NTI2 1148 aa25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 ZNF214Q9UL59 606 aaPredicted RBP25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 ELP1O95163 1332 aa25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 SYNRGQ9UMZ2 1314 aa25.77■■□□□ 1.72
CNEP1R1-201ENST00000389134 CCSAPQ6IQ19 270 aaPredicted RBP25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 CCDC129Q6ZRS4 1044 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 ITPRIPQ8IWB1 547 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 FTSJ3Q8IY81 847 aaKnown RBP25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 GLT1D1Q96MS3 346 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 KANSL2Q9H9L4 492 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 GOPCQ9HD26 462 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 EXOC6BQ9Y2D4 811 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 SYNGAP1Q96PV0 1343 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 GBF1Q92538 1859 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 MYH7P12883 1935 aa25.76■■□□□ 1.71
CNEP1R1-201ENST00000389134 DUSP11O75319 330 aaKnown RBP25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 EEF2P13639 858 aaKnown RBP25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 CDK8P49336 464 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 TMEM240Q5SV17 173 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 AMOTL1Q8IY63 956 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 REPS2Q8NFH8 660 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 PPM1EQ8WY54 764 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms