RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 WDHD1O75717 1129 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 TUBBP07437 444 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 IVLP07476 585 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 USP5P45974 858 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 NT5C2P49902 561 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 PDE4BQ07343 736 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 SH3RF3Q8TEJ3 882 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 WASF1Q92558 559 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 WDR24Q96S15 920 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 MCM9Q9NXL9 1143 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 ADAM21Q9UKJ8 722 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 ECM29Q5VYK3 1845 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 CUTAO60888 179 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 PRDM1O75626 825 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 EIF3JO75822 258 aaKnown RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 LONRF2Q1L5Z9 754 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 TRIM22Q8IYM9 498 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 CEP112Q8N8E3 955 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 MASTLQ96GX5 879 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 NAA15Q9BXJ9 866 aaKnown RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 SLC26A6Q9BXS9 759 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 RTFDC1Q9BY42 306 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-202ENST00000381990 COA1Q9GZY4 146 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 EFCC1Q9HA90 598 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 FANCLQ9NW38 375 aa10.14□□□□□ -0.79
GPNMB-202ENST00000381990 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 ERLIN1O75477 346 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC175P0C221 793 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CYP2D6P10635 497 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 TRIM29Q14134 588 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 MFSD14BQ5SR56 506 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 IFIT1BQ5T764 474 aaKnown RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 C12orf60Q5U649 245 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 KRT40Q6A162 431 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 SHC4Q6S5L8 630 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 TC2NQ8N9U0 490 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 MLKLQ8NB16 471 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 AIFM3Q96NN9 605 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 PLCG2P16885 1265 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 ACTN2P35609 894 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 PTPAQ15257 358 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CT47A1Q5JQC4 288 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 TRIML1Q8N9V2 468 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CNNM3Q8NE01 707 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC34Q96HJ3 373 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 TMX4Q9H1E5 349 aaPredicted RBP10.13□□□□□ -0.79
GPNMB-202ENST00000381990 INTS13Q9NVM9 706 aa10.13□□□□□ -0.79
GPNMB-202ENST00000381990 NAV1Q8NEY1 1877 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 GPR75-ASB3A0A0A6YYF3 556 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CALM1P0DP23 149 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CALM2P0DP24 149 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CALM3P0DP25 149 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 ZNF18P17022 549 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 MARCKSP29966 332 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CHMP4BP1P59074 171 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 EVX2Q03828 476 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 PNOCQ13519 176 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 NT5DC1Q5TFE4 455 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 HDXQ7Z353 690 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CRACR2BQ8N4Y2 399 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 PANX2Q96RD6 677 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 TRIM34Q9BYJ4 488 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 RGS17Q9UGC6 210 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 RAB21Q9UL25 225 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 TMEM232C9JQI7 657 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 MYO1CO00159 1063 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 RPS6KA5O75582 802 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 DDAH1O94760 285 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 DEXIO95424 95 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 BTDP43251 543 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 DPP8Q6V1X1 898 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 FAM177A1Q8N128 213 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC12Q8WUD4 166 aaPredicted RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 ZCCHC17Q9NP64 241 aaKnown RBP10.12□□□□□ -0.79
GPNMB-202ENST00000381990 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 SUGT1Q9Y2Z0 365 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 GAKO14976 1311 aa10.12□□□□□ -0.79
GPNMB-202ENST00000381990 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms