RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 EPS15P42566 896 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 JAG1P78504 1218 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 HTRA3P83110 453 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 SLC35G1Q2M3R5 365 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 ASPRV1Q53RT3 343 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 RCOR1Q9UKL0 485 aa16.76■□□□□ 0.27
SYNGR1-204ENST00000381535 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 FRMPD2Q68DX3 1309 aaPredicted RBP16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 CYTH3O43739 400 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 MBD3O95983 291 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 UBE2HP62256 183 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 ICA1Q05084 483 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 MYSM1Q5VVJ2 828 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 KLRG1Q96E93 195 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 SPZ1Q9BXG8 430 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 DEFB129Q9H1M3 183 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 TAF1DQ9H5J8 278 aaPredicted RBP16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 VAT1LQ9HCJ6 419 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 GPCPD1Q9NPB8 672 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
SYNGR1-204ENST00000381535 ELP1O95163 1332 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 PHF20Q9BVI0 1012 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 GZF1Q9H116 711 aaPredicted RBP16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 FOXP1Q9H334 677 aaPredicted RBP16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 RIOX1Q9H6W3 641 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 SH3GLB2Q9NR46 395 aa16.74■□□□□ 0.27
SYNGR1-204ENST00000381535 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 POTEJP0CG39 1038 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 KRT2P35908 639 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 CAP2P40123 477 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 HIRAP54198 1017 aaPredicted RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 NLRP5P59047 1200 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 GPATCH4Q5T3I0 446 aaKnown RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 APOBEC3FQ8IUX4 373 aaKnown RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 SHISA4Q96DD7 197 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
SYNGR1-204ENST00000381535 GOLGA6L4A6NEF3 574 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 F5H6K3 240 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 RAD21O60216 631 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 KLRC3Q07444 240 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 OXER1Q8TDS5 423 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 ARHGEF10LQ9HCE6 1279 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 BRMS1Q9HCU9 246 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 MYH6P13533 1939 aa16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 GREB1LQ9C091 1923 aaPredicted RBP16.72■□□□□ 0.27
SYNGR1-204ENST00000381535 CALML3P27482 149 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 ANO1Q5XXA6 986 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 KCTD1Q719H9 257 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 GMCL1P1Q8NEA9 526 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 PIGSQ96S52 555 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 SYNPO2Q9UMS6 1093 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 CLIC4Q9Y696 253 aa16.71■□□□□ 0.27
SYNGR1-204ENST00000381535 A0A1W2PRG0 241 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 SLC1A4P43007 532 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 NR5A1Q13285 461 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 GSE1Q14687 1217 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 STK38Q15208 465 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 HEATR3Q7Z4Q2 680 aa16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 FAM177A1Q8N128 213 aaPredicted RBP16.7■□□□□ 0.26
SYNGR1-204ENST00000381535 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms