RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
FAM49A-201ENST00000381323 F5H6K3 240 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 KLRC3Q07444 240 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 IMMTQ16891 758 aaKnown RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 SLFNL1Q499Z3 407 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 CTR9Q6PD62 1173 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 ZBTB22O15209 634 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 PEX10O60683 326 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 DSG3P32926 999 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 ESR2Q92731 530 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 FERMT2Q96AC1 680 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 MYH2Q9UKX2 1941 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 ADGRA2Q96PE1 1338 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 TRIOBPQ9H2D6 2365 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 ZEB2O60315 1214 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 MCCP23508 829 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 STAT2P52630 851 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 SHROOM1Q2M3G4 852 aaPredicted RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 MCMDC2Q4G0Z9 681 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 CCDC178Q5BJE1 867 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 CWC27Q6UX04 472 aaKnown RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 KAT14Q9H8E8 782 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 PTPDC1A2A3K4 754 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 XRCC5P13010 732 aaKnown RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 RRP1BQ14684 758 aaKnown RBP9.23□□□□□ -0.93
FAM49A-201ENST00000381323 FAM160B2Q86V87 743 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 DNAJC18Q9H819 358 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 FEM1BQ9UK73 627 aa9.23□□□□□ -0.93
FAM49A-201ENST00000381323 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
FAM49A-201ENST00000381323 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
FAM49A-201ENST00000381323 Q3C1V9 767 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 OSBP2Q969R2 916 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 C12orf42Q96LP6 360 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 TXNRD2Q9NNW7 524 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 FDX1P10109 184 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 TRIB2Q92519 343 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 FBXO28Q9NVF7 368 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 DDX20Q9UHI6 824 aaKnown RBP9.22□□□□□ -0.93
FAM49A-201ENST00000381323 CCPG1Q9ULG6 757 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 PNMA2Q9UL42 364 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 PCDHB15Q9Y5E8 787 aa9.22□□□□□ -0.93
FAM49A-201ENST00000381323 DCDC2CA8MYV0 355 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.93
FAM49A-201ENST00000381323 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 SHCBP1Q8NEM2 672 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 GLT1D1Q96MS3 346 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 XPNPEP3Q9NQH7 507 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 NYAP2Q9P242 653 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 FAM184BQ9ULE4 1060 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 PSME4Q14997 1843 aa9.21□□□□□ -0.93
FAM49A-201ENST00000381323 TLR3O15455 904 aaKnown RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 RAG1P15918 1043 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 CACNB2Q08289 660 aaPredicted RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 CCL14Q16627 93 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 FAM47CQ5HY64 1035 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 NFXL1Q6ZNB6 911 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 ADD3Q9UEY8 706 aaKnown RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 NDUFB10O96000 172 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 PGK2P07205 417 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 PDE1AP54750 535 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 GJC2Q5T442 439 aaPredicted RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 MTIF3Q9H2K0 278 aaKnown RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 VAT1LQ9HCJ6 419 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 PPP1R9AQ9ULJ8 1098 aa9.21□□□□□ -0.94
FAM49A-201ENST00000381323 COL2A1P02458 1487 aaPredicted RBP9.21□□□□□ -0.94
FAM49A-201ENST00000381323 LBX2Q6XYB7 198 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 CHD1LQ86WJ1 897 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 SEC62Q99442 399 aaKnown RBP9.2□□□□□ -0.94
FAM49A-201ENST00000381323 STAP2Q9UGK3 403 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 COLQQ9Y215 455 aaPredicted RBP9.2□□□□□ -0.94
FAM49A-201ENST00000381323 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
FAM49A-201ENST00000381323 SBK1Q52WX2 424 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 CEP95Q96GE4 821 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 ACAD9Q9H845 621 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 AKR1A1P14550 325 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 TRIM32Q13049 653 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 RNF146Q9NTX7 359 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 MYH13Q9UKX3 1938 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 GSG1L2A8MUP6 293 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 M0R2C6 588 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 KCTD1Q719H9 257 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 BTBD7Q9P203 1132 aa9.2□□□□□ -0.94
FAM49A-201ENST00000381323 CCND3P30281 292 aaPredicted RBP9.19□□□□□ -0.94
FAM49A-201ENST00000381323 TRAF1Q13077 416 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms