RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 STK38Q15208 465 aa13.21□□□□□ -0.29
PITRM1-202ENST00000380989 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
PITRM1-202ENST00000380989 GDAP1L1Q96MZ0 367 aa13.21□□□□□ -0.29
PITRM1-202ENST00000380989 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.29
PITRM1-202ENST00000380989 GAKO14976 1311 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.3
PITRM1-202ENST00000380989 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.3
PITRM1-202ENST00000380989 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.3
PITRM1-202ENST00000380989 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 FANCLQ9NW38 375 aa13.21□□□□□ -0.3
PITRM1-202ENST00000380989 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
PITRM1-202ENST00000380989 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
PITRM1-202ENST00000380989 CXCL9Q07325 125 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 PDE4BQ07343 736 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
PITRM1-202ENST00000380989 TEKT1Q969V4 418 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-202ENST00000380989 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 CDK5RAP2Q96SN8 1893 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 VWA3AA6NCI4 1184 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
PITRM1-202ENST00000380989 TADA3O75528 432 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 ZNF202O95125 648 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 EGFRP00533 1210 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 PPP4CP60510 307 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 DHX58Q96C10 678 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
PITRM1-202ENST00000380989 ZSCAN26Q16670 478 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 ZNF646O15015 1829 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 UBASH3AP57075 661 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 TNNT3P45378 269 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 PPARDQ03181 441 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 C12orf60Q5U649 245 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 NFXL1Q6ZNB6 911 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 ARHGAP27Q6ZUM4 889 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-202ENST00000380989 LY9Q9HBG7 655 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
PITRM1-202ENST00000380989 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 PFKFB1P16118 471 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 CASP1P29466 404 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 GJA3Q9Y6H8 435 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 MYO1CO00159 1063 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 RSBN1LQ6PCB5 846 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
PITRM1-202ENST00000380989 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
PITRM1-202ENST00000380989 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 GRIN1Q05586 938 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-202ENST00000380989 PDE11AQ9HCR9 933 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 VPS18Q9P253 973 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-202ENST00000380989 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 TNKSO95271 1327 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 FER1L6Q2WGJ9 1857 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 PHKBQ93100 1093 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
PITRM1-202ENST00000380989 MRPL44Q9H9J2 332 aaKnown RBP13.17□□□□□ -0.3
PITRM1-202ENST00000380989 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
PITRM1-202ENST00000380989 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 BMP6P22004 513 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 RHOXF2Q9BQY4 288 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 KRT23Q9C075 422 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 TCP10L2B9ZVM9 353 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 NEMFO60524 1076 aa13.16□□□□□ -0.3
PITRM1-202ENST00000380989 TFAP4Q01664 338 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms