RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC91Q7Z6B0 441 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 PCDHB6Q9Y5E3 794 aa14.16□□□□□ -0.14
DNMT3A-204ENST00000380756 USP27XA6NNY8 438 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 CYP27B1O15528 508 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 DDAH1O94760 285 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 DESP17661 470 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 CHRNDQ07001 517 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 ASIC2Q16515 512 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 STK32BQ9NY57 414 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 RFX7Q2KHR2 1363 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 PNMA6AP0CW24 399 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 LONP1P36776 959 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 ADCY7P51828 1080 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 MED4Q9NPJ6 270 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 CEP104O60308 925 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 USP37Q86T82 979 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 NELFCDQ8IXH7 590 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 STMN4Q9H169 189 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 MTRF1LQ9UGC7 380 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 PCP11498 1178 aaKnown RBP14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 TRAPPC10P48553 1259 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 HAUS3Q68CZ6 603 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 PPP4R3AQ6IN85 833 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 TBC1D7Q9P0N9 293 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 MYO1AQ9UBC5 1043 aa14.15□□□□□ -0.14
DNMT3A-204ENST00000380756 SOWAHDA6NJG2 315 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 UFL1O94874 794 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 KIF4AO95239 1232 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 INPP5BP32019 993 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 KLHL7Q8IXQ5 586 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 LRRC45Q96CN5 670 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 ADGRL3Q9HAR2 1447 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 PIH1D3Q9NQM4 214 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 SFMBT2Q5VUG0 894 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 CEP57Q86XR8 500 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 CCDC77Q9BR77 488 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 NUCKS1Q9H1E3 243 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 MCAMP43121 646 aa14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 STRBPQ96SI9 672 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
DNMT3A-204ENST00000380756 A0A1W2PRG0 241 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 OR52Z1P0C646 297 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 TCP1P17987 556 aaKnown RBP14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 IQCB1Q15051 598 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 TERF2Q15554 542 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 CCDC25Q86WR0 208 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 CERS3Q8IU89 383 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 LCORLQ8N3X6 602 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 ENC1O14682 589 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 PTPREP23469 700 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 TECP42680 631 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 RPS6KA1Q15418 735 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 RESP18Q5W5W9 173 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 FMNL3Q8IVF7 1028 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 FAM71BQ8TC56 605 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 EPSTI1Q96J88 318 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 TUBGCP2Q9BSJ2 902 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 ABCA9Q8IUA7 1624 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 ADGRB1O14514 1584 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 KLRF2D3W0D1 207 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 BPIFA3Q9BQP9 254 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 HYOU1Q9Y4L1 999 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 MSL1Q68DK7 614 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 ACRBPQ8NEB7 543 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 BICD1Q96G01 975 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
DNMT3A-204ENST00000380756 KMT5BQ4FZB7 885 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 MB21D2Q8IYB1 491 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 GOLGA5Q8TBA6 731 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 NAP1L3Q99457 506 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 GLT8D2Q9H1C3 349 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 CALCOCO2Q13137 446 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 RUFY4Q6ZNE9 571 aa14.12□□□□□ -0.15
DNMT3A-204ENST00000380756 PANX2Q96RD6 677 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms