RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 TROAPQ12815 778 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 MCM6Q14566 821 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 CAGE1Q8TC20 777 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 PHACTR2O75167 634 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 TRIM21P19474 475 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 CDC25BP30305 580 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 KRT9P35527 623 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 ETF1P62495 437 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 PKN1Q16512 942 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 SRRTQ9BXP5 876 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 IMPACTQ9P2X3 320 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 KIF5CO60282 957 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 KIAA1328Q86T90 577 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 CCDC47Q96A33 483 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 WDR24Q96S15 920 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 PIGSQ96S52 555 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
DNMT3A-203ENST00000380746 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 ARGLU1Q9NWB6 273 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 DCCP43146 1447 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 ENC1O14682 589 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 MRPS25P82663 173 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 PDE4DQ08499 809 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 STIM1Q13586 685 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 SEC23AQ15436 765 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 PTPROQ16827 1216 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 SLC39A2Q9NP94 309 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 LDHCP07864 332 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 SLFN14P0C7P3 912 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 LRRC41Q15345 812 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 DPP8Q6V1X1 898 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 TMEM60Q9H2L4 133 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 KCNG1Q9UIX4 513 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 HPSEQ9Y251 543 aa12.35□□□□□ -0.43
DNMT3A-203ENST00000380746 IKBKBO14920 756 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 CCDC175P0C221 793 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ST5P78524 1137 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 PAK1Q13153 545 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 TIGD1Q96MW7 591 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 GPSM2P81274 684 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 UBE2SQ16763 222 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 WDR66Q8TBY9 1149 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 TMEM47Q9BQJ4 181 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 MMRN2Q9H8L6 949 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 FAM205AQ6ZU69 1335 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 MACROD2A1Z1Q3 448 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 SERPINB2P05120 415 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 EXOC1Q9NV70 894 aa12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 SCAF8Q9UPN6 1271 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-203ENST00000380746 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 CCP110O43303 1012 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 CALML3P27482 149 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 MORC3Q14149 939 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 SHISA4Q96DD7 197 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 RRP36Q96EU6 259 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L5A8MUK1 530 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 KIF2AO00139 706 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 USH1GQ495M9 461 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 ANKRD13CQ8N6S4 541 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 OSBPL5Q9H0X9 879 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 NELFCDQ8IXH7 590 aa12.33□□□□□ -0.44
DNMT3A-203ENST00000380746 CSGALNACT2Q8N6G5 542 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms