RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SLC1A4P43007 532 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 TROAPQ12815 778 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SMN1-202ENST00000380707 MYL10Q9BUA6 226 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 BRPF3Q9ULD4 1205 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 THSD7BQ9C0I4 1608 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 BMP3P12645 472 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 HOXA7P31268 230 aaPredicted RBP14.82□□□□□ -0.04
SMN1-202ENST00000380707 APOBRQ0VD83 1088 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 CATIPQ7Z7H3 387 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 ZNF654Q8IZM8 581 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
SMN1-202ENST00000380707 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 ALDH8A1Q9H2A2 487 aaPredicted RBP14.82□□□□□ -0.04
SMN1-202ENST00000380707 SLC12A7Q9Y666 1083 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 AK2P54819 239 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 RAB11FIP4Q86YS3 637 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 ASCC2Q9H1I8 757 aaPredicted RBP14.81□□□□□ -0.04
SMN1-202ENST00000380707 SLC45A1Q9Y2W3 748 aa14.81□□□□□ -0.04
SMN1-202ENST00000380707 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
SMN1-202ENST00000380707 KLF18A0A0U1RQI7 1052 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 TMEM232C9JQI7 657 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 CYP2C8P10632 490 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 RXRAP19793 462 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 ZNF543Q08ER8 600 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMN1-202ENST00000380707 RABEP1Q15276 862 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 APOA5Q6Q788 366 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 FBXO28Q9NVF7 368 aa14.8□□□□□ -0.04
SMN1-202ENST00000380707 FLOT1O75955 427 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 DDAH1O94760 285 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 EVCP57679 992 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 MICU3Q86XE3 530 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 STAG2Q8N3U4 1231 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 P2RX7Q99572 595 aaKnown RBP14.79□□□□□ -0.04
SMN1-202ENST00000380707 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
SMN1-202ENST00000380707 GPCPD1Q9NPB8 672 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 MAD2L2Q9UI95 211 aa14.79□□□□□ -0.04
SMN1-202ENST00000380707 ISY1Q9ULR0 285 aaKnown RBP14.79□□□□□ -0.04
SMN1-202ENST00000380707 PARP1P09874 1014 aaKnown RBP14.78□□□□□ -0.04
SMN1-202ENST00000380707 OSBPP22059 807 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 IRX3P78415 501 aaPredicted RBP14.78□□□□□ -0.04
SMN1-202ENST00000380707 COG2Q14746 738 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 GRM4Q14833 912 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 POTEEQ6S8J3 1075 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 NAP1L2Q9ULW6 460 aaPredicted RBP14.78□□□□□ -0.04
SMN1-202ENST00000380707 HPS5Q9UPZ3 1129 aa14.78□□□□□ -0.04
SMN1-202ENST00000380707 PALM3A6NDB9 673 aaPredicted RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 GOLGA8BA8MQT2 603 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 ZBTB43O43298 467 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 TRPA1O75762 1119 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 ALDH1A1P00352 501 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 PDIA3P30101 505 aaKnown RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 SLC16A2P36021 539 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 STAT2P52630 851 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 HERVK_113P62684 666 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 MAP2K1Q02750 393 aaPredicted RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 CRHR2Q13324 411 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 ANKRD1Q15327 319 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 TAF1CQ15572 869 aaPredicted RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 GPATCH4Q5T3I0 446 aaKnown RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 NOL8Q76FK4 1167 aaKnown RBP14.77□□□□□ -0.04
SMN1-202ENST00000380707 FANCBQ8NB91 859 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 MAP3K14Q99558 947 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 SLF1Q9BQI6 1058 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 CPVLQ9H3G5 476 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 R3HDMLQ9H3Y0 253 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 PNMA3Q9UL41 463 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.04
SMN1-202ENST00000380707 RLFQ13129 1914 aa14.77□□□□□ -0.05
SMN1-202ENST00000380707 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
SMN1-202ENST00000380707 CA12O43570 354 aa14.76□□□□□ -0.05
SMN1-202ENST00000380707 PLA2G6O60733 806 aa14.76□□□□□ -0.05
SMN1-202ENST00000380707 CALM1P0DP23 149 aa14.76□□□□□ -0.05
SMN1-202ENST00000380707 CALM2P0DP24 149 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms