RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 NID2Q14112 1375 aa16.42■□□□□ 0.22
HERPUD1-203ENST00000379792 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 CCDC196A0A1B0GTZ2 297 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 PTPDC1A2A3K4 754 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 KLRF2D3W0D1 207 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 SLC1A4P43007 532 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 SH2D4AQ9H788 454 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 RBM28Q9NW13 759 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 OTOFQ9HC10 1997 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 hCG_1642624A0A1W2PR95 340 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 FKBP1BP68106 108 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 SLC35G1Q2M3R5 365 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 ERO1BQ86YB8 467 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 HHIPL1Q96JK4 782 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
HERPUD1-203ENST00000379792 GJB2P29033 226 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 SLC16A2P36021 539 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 HMGCS2P54868 508 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 BACE1P56817 501 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 FUT2Q10981 343 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 CPLX2Q6PUV4 134 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 LLPHQ9BRT6 129 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 SLC26A6Q9BXS9 759 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 PAPPA2Q9BXP8 1791 aa16.4■□□□□ 0.22
HERPUD1-203ENST00000379792 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 IRF6O14896 467 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 BMP3P12645 472 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 IFNAR1P17181 557 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 VEGFBP49765 207 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 PPP2R5BQ15173 497 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
HERPUD1-203ENST00000379792 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 GJA5P36382 358 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 GNAQP50148 359 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 FOSBP53539 338 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 HUNKP57058 714 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 PPATQ06203 517 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 CYTH3O43739 400 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 CDKL5O76039 1030 aa16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 GPATCH4Q5T3I0 446 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-203ENST00000379792 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-203ENST00000379792 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
HERPUD1-203ENST00000379792 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
HERPUD1-203ENST00000379792 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
HERPUD1-203ENST00000379792 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-203ENST00000379792 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 VCAM1P19320 739 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 USP14P54578 494 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 SNAP25P60880 206 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 PPIL2Q13356 520 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 PHIPQ8WWQ0 1821 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 TRIM22Q8IYM9 498 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 LPAR1Q92633 364 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 CAPNS2Q96L46 248 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 TMOD4Q9NZQ9 345 aa16.36■□□□□ 0.21
HERPUD1-203ENST00000379792 UNCXA6NJT0 531 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 GADL1Q6ZQY3 521 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 WNK4Q96J92 1243 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 PIGSQ96S52 555 aa16.35■□□□□ 0.21
HERPUD1-203ENST00000379792 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms