RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 DMGDHQ9UI17 866 aaKnown RBP12.13□□□□□ -0.47
USP6NL-202ENST00000379237 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 PPP6R2O75170 966 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 MYL6BP14649 208 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 BUB1O43683 1085 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 RPS6KA3P51812 740 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 ICA1Q05084 483 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 POLA2Q14181 598 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 HHATQ5VTY9 493 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 TEKT4Q8WW24 435 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 ATP5JP18859 108 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 MORC3Q14149 939 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 TRAPPC11Q7Z392 1133 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 BSDC1Q9NW68 430 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-202ENST00000379237 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
USP6NL-202ENST00000379237 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 STXBP3O00186 592 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 GRM8O00222 908 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 C1orf141Q5JVX7 400 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 VSIG1Q86XK7 387 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 MGARPQ8TDB4 240 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CCDC97Q96F63 343 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 SMARCAL1Q9NZC9 954 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CEP152O94986 1710 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 DIS3L2Q8IYB7 885 aaKnown RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 GGT7Q9UJ14 662 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CPSF1Q10570 1443 aaKnown RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM37O94972 964 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 MOCS3O95396 460 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 KRT31Q15323 416 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 CABP5Q9NP86 173 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-202ENST00000379237 FANCAO15360 1455 aa12.11□□□□□ -0.47
USP6NL-202ENST00000379237 KDRP35968 1356 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM75PA6NK02 468 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 ABL1P00519 1130 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 FERP16591 822 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 CASP1P29466 404 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 CDC27P30260 824 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 ARID5AQ03989 594 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 P3H4Q92791 437 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 PSMA7O14818 248 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 GYPCP04921 128 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 RMND1Q9NWS8 449 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 CROCC2H7BZ55 1655 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 SKOR1P84550 965 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TFCP2Q12800 502 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM74Q86UV6 250 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 PPFIBP2Q8ND30 876 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms