RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RBM43Q6ZSC3 357 aaKnown RBP22.27■■□□□ 1.16
SSU72-204ENST00000378726 SH3BP5LQ7L8J4 393 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 ZNRF3Q9ULT6 936 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 KINO60870 393 aaKnown RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 CMA1P23946 247 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 NDUFA8P51970 172 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 EIF6P56537 245 aaKnown RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 TYRO3Q06418 890 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 RASGRP2Q7LDG7 609 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 CLIP2Q9UDT6 1046 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 ZNF646O15015 1829 aaPredicted RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 MPHOSPH10O00566 681 aaKnown RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 ATP2B1P20020 1258 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 NPY5RQ15761 445 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 NIM1KQ8IY84 436 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 FMR1NBQ8N0W7 255 aaPredicted RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 FAM200AQ8TCP9 573 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 GMLQ99445 158 aa22.26■■□□□ 1.15
SSU72-204ENST00000378726 ZBTB12Q9Y330 459 aaPredicted RBP22.26■■□□□ 1.15
SSU72-204ENST00000378726 TTLL1O95922 423 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 GTF2F1P35269 517 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSU72-204ENST00000378726 EARS2Q5JPH6 523 aaKnown RBP22.25■■□□□ 1.15
SSU72-204ENST00000378726 FOXP4Q8IVH2 680 aaPredicted RBP22.25■■□□□ 1.15
SSU72-204ENST00000378726 ZNF710Q8N1W2 664 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 OGFOD1Q8N543 542 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 CCDC17Q96LX7 622 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 DNAJC18Q9H819 358 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 HDAC9Q9UKV0 1011 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 PCDHB6Q9Y5E3 794 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 KIF13BQ9NQT8 1826 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 USP17L5A8MUK1 530 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 LUZP1Q86V48 1076 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 CLEC10AQ8IUN9 316 aa22.25■■□□□ 1.15
SSU72-204ENST00000378726 ENTPD3O75355 529 aa22.24■■□□□ 1.15
SSU72-204ENST00000378726 GPKOWQ92917 476 aaPredicted RBP eCLIP22.24■■□□□ 1.15
SSU72-204ENST00000378726 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
SSU72-204ENST00000378726 SH3GLB2Q9NR46 395 aa22.24■■□□□ 1.15
SSU72-204ENST00000378726 FAM205CA6NFA0 338 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 FAM196BA6NMK8 535 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 CTAGE5O15320 804 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 LRRC47Q8N1G4 583 aaKnown RBP22.23■■□□□ 1.15
SSU72-204ENST00000378726 SPZ1Q9BXG8 430 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 TRIM34Q9BYJ4 488 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 COL4A5P29400 1685 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 TPM3P06753 285 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 PDHBP11177 359 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 DLGAP5Q15398 846 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 TNFRSF25Q93038 417 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 CLIC6Q96NY7 704 aa22.23■■□□□ 1.15
SSU72-204ENST00000378726 SPDYE2BA6NHP3 402 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 SPDYE6P0CI01 402 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 CALML3P27482 149 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 SMARCA1P28370 1054 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 CERKLQ49MI3 558 aaPredicted RBP22.22■■□□□ 1.15
SSU72-204ENST00000378726 CEP131Q9UPN4 1083 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 CUTAO60888 179 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 SHC4Q6S5L8 630 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 KRI1Q8N9T8 703 aaKnown RBP22.22■■□□□ 1.15
SSU72-204ENST00000378726 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 CBX8Q9HC52 389 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 VAT1LQ9HCJ6 419 aa22.22■■□□□ 1.15
SSU72-204ENST00000378726 GOLGA6L6A8MZA4 724 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 PFKFB1P16118 471 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 PTGS1P23219 599 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 CXCL9Q07325 125 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 ANO6Q4KMQ2 910 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 NOM1Q5C9Z4 860 aaKnown RBP22.21■■□□□ 1.15
SSU72-204ENST00000378726 SDF4Q9BRK5 362 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 UBA5Q9GZZ9 404 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 TRIM75PA6NK02 468 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 ZNF202O95125 648 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 WWC2Q6AWC2 1192 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 TATDN1Q6P1N9 297 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 HEATR3Q7Z4Q2 680 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
SSU72-204ENST00000378726 ADAMTS3O15072 1205 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 TYW1BQ6NUM6 668 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 BLIDQ8IZY5 108 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 AGBL3Q8NEM8 1001 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 JDP2Q8WYK2 163 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 BARHL2Q9NY43 387 aa22.2■■□□□ 1.14
SSU72-204ENST00000378726 FRMPD2Q68DX3 1309 aaPredicted RBP22.19■■□□□ 1.14
SSU72-204ENST00000378726 CLRN2A0PK11 232 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 TCP10L2B9ZVM9 353 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 SNHG28P0DPA3 235 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 PPP4R3BQ5MIZ7 849 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 RRP36Q96EU6 259 aaKnown RBP22.19■■□□□ 1.14
SSU72-204ENST00000378726 SGIP1Q9BQI5 828 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 PCDHA4Q9UN74 947 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 CD2APQ9Y5K6 639 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 PTPREP23469 700 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 ASPRV1Q53RT3 343 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 RESP18Q5W5W9 173 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 PIK3AP1Q6ZUJ8 805 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 METTL16Q86W50 562 aaKnown RBP22.19■■□□□ 1.14
SSU72-204ENST00000378726 HOMER1Q86YM7 354 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 ZNF70Q9UC06 446 aaPredicted RBP22.19■■□□□ 1.14
SSU72-204ENST00000378726 BCS1LQ9Y276 419 aa22.19■■□□□ 1.14
SSU72-204ENST00000378726 CCDC148Q8NFR7 591 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms