RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 SNX14Q9Y5W7 946 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 ZSWIM8A7E2V4 1837 aa20.24■□□□□ 0.83
ITM2B-201ENST00000378549 FKTNO75072 461 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 HMGB1P09429 215 aaKnown RBP20.23■□□□□ 0.83
ITM2B-201ENST00000378549 ANTXR2P58335 489 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 SP3Q02447 781 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 COG2Q14746 738 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 WTAPQ15007 396 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 C17orf99Q6UX52 265 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 DOCK3Q8IZD9 2030 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 PNMA1Q8ND90 353 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 ZNF296Q8WUU4 475 aaPredicted RBP20.23■□□□□ 0.83
ITM2B-201ENST00000378549 DCAF4Q8WV16 495 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 MTA3Q9BTC8 594 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 HOXC10Q9NYD6 342 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 MYPNQ86TC9 1320 aa20.23■□□□□ 0.83
ITM2B-201ENST00000378549 SPDYE16A6NNV3 312 aaPredicted RBP20.22■□□□□ 0.83
ITM2B-201ENST00000378549 SEC23AQ15436 765 aa20.22■□□□□ 0.83
ITM2B-201ENST00000378549 ADCK5Q3MIX3 580 aa20.22■□□□□ 0.83
ITM2B-201ENST00000378549 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
ITM2B-201ENST00000378549 ANKRD13CQ8N6S4 541 aa20.22■□□□□ 0.83
ITM2B-201ENST00000378549 CHMP4CQ96CF2 233 aa20.22■□□□□ 0.83
ITM2B-201ENST00000378549 TMEM87BQ96K49 555 aa20.22■□□□□ 0.83
ITM2B-201ENST00000378549 JAKMIP1Q96N16 626 aaKnown RBP20.22■□□□□ 0.83
ITM2B-201ENST00000378549 BCRP11274 1271 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 PSMA5P28066 241 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
ITM2B-201ENST00000378549 FAM110CQ1W6H9 321 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
ITM2B-201ENST00000378549 SLF1Q9BQI6 1058 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 PAGR1Q9BTK6 254 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 WDR19Q8NEZ3 1342 aa20.21■□□□□ 0.83
ITM2B-201ENST00000378549 SEC24BO95487 1268 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 PDHBP11177 359 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 DSG3P32926 999 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 STAT2P52630 851 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 KIF22Q14807 665 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 BLOC1S2Q6QNY1 142 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 LBX2Q6XYB7 198 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 RASGRP2Q7LDG7 609 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 ERO1AQ96HE7 468 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 PRDM10Q9NQV6 1147 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 FBXO28Q9NVF7 368 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
ITM2B-201ENST00000378549 PLXNB2O15031 1838 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 TMEM232C9JQI7 657 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
ITM2B-201ENST00000378549 KCTD1Q719H9 257 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 FAM160B2Q86V87 743 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 IGDCC4Q8TDY8 1250 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 CHURC1Q8WUH1 139 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 ATG4CQ96DT6 458 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 RABGAP1Q9Y3P9 1069 aa20.19■□□□□ 0.82
ITM2B-201ENST00000378549 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 FGD1P98174 961 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 COL9A3Q14050 684 aaPredicted RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 CATIPQ7Z7H3 387 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 TMTC2Q8N394 836 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 GPRC5AQ8NFJ5 357 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 LRRC2Q9BYS8 371 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 MORF4L1Q9UBU8 362 aa20.18■□□□□ 0.82
ITM2B-201ENST00000378549 FRMPD2Q68DX3 1309 aaPredicted RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
ITM2B-201ENST00000378549 CCDC69A6NI79 296 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 SNHG28P0DPA3 235 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ANAPC15P60006 121 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ERVK-9P63128 1117 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ERVK-24P63145 666 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ZNF543Q08ER8 600 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 GPATCH4Q5T3I0 446 aaKnown RBP20.17■□□□□ 0.82
ITM2B-201ENST00000378549 CD99L2Q8TCZ2 262 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 KIFC2Q96AC6 838 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 TCEANC2Q96MN5 208 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 TXNRD2Q9NNW7 524 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 RBPJLQ9UBG7 517 aa20.17■□□□□ 0.82
ITM2B-201ENST00000378549 CTDP1Q9Y5B0 961 aaPredicted RBP20.17■□□□□ 0.82
ITM2B-201ENST00000378549 ZNFX1Q9P2E3 1918 aaKnown RBP20.17■□□□□ 0.82
ITM2B-201ENST00000378549 PLA2G6O60733 806 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 PARP1P09874 1014 aaKnown RBP20.16■□□□□ 0.82
ITM2B-201ENST00000378549 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 LIFRP42702 1097 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 CCNA1P78396 465 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 EXOSC10Q01780 885 aaKnown RBP20.16■□□□□ 0.82
ITM2B-201ENST00000378549 ASPRV1Q53RT3 343 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
ITM2B-201ENST00000378549 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
ITM2B-201ENST00000378549 SENP2Q9HC62 589 aa20.16■□□□□ 0.82
ITM2B-201ENST00000378549 GPHNQ9NQX3 736 aaPredicted RBP20.16■□□□□ 0.82
ITM2B-201ENST00000378549 VWA5AO00534 786 aa20.15■□□□□ 0.82
ITM2B-201ENST00000378549 ECM2O94769 699 aaPredicted RBP20.15■□□□□ 0.82
ITM2B-201ENST00000378549 CPA1P15085 419 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms