RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 PIP4K2BP78356 416 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 DZIP1Q86YF9 867 aaKnown RBP17.42■□□□□ 0.38
RER1-203ENST00000378513 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
RER1-203ENST00000378513 TMEM60Q9H2L4 133 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 KDM4FA0A1W2PPD8 638 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 BMS1Q14692 1282 aaKnown RBP17.42■□□□□ 0.38
RER1-203ENST00000378513 INF2Q27J81 1249 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 ADGRG1Q9Y653 693 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 MYH6P13533 1939 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 CCDC175P0C221 793 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 PMS1P54277 932 aaKnown RBP17.42■□□□□ 0.38
RER1-203ENST00000378513 HNRNPH2P55795 449 aaKnown RBP17.42■□□□□ 0.38
RER1-203ENST00000378513 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 NELFBQ8WX92 580 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
RER1-203ENST00000378513 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
RER1-203ENST00000378513 USP5P45974 858 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 SH3RF1Q7Z6J0 888 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 PARD6BQ9BYG5 372 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
RER1-203ENST00000378513 SUGCTQ9HAC7 445 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 IL17RBQ9NRM6 502 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 MRFAP1Q9Y605 127 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 MAP3K9P80192 1104 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 ATP2C1P98194 919 aaPredicted RBP17.41■□□□□ 0.38
RER1-203ENST00000378513 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 SH3RF3Q8TEJ3 882 aaPredicted RBP17.41■□□□□ 0.38
RER1-203ENST00000378513 HPS3Q969F9 1004 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 CHP1Q99653 195 aa17.41■□□□□ 0.38
RER1-203ENST00000378513 PRCPP42785 496 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 ERVK-24P63145 666 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 SLC35G1Q2M3R5 365 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 MAPKAPK5Q8IW41 473 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 NID2Q14112 1375 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 NKRFO15226 690 aaKnown RBP eCLIP17.4■□□□□ 0.383e-7■□□□□ 10
RER1-203ENST00000378513 GNPATO15228 680 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 MFAP3LO75121 409 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 RHOXF2BP0C7M4 288 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 KIF4BQ2VIQ3 1234 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 RHOXF2Q9BQY4 288 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 LRP5O75197 1615 aa17.4■□□□□ 0.38
RER1-203ENST00000378513 STAT6P42226 847 aa17.39■□□□□ 0.38
RER1-203ENST00000378513 E2F4Q16254 413 aa17.39■□□□□ 0.38
RER1-203ENST00000378513 CDKAL1Q5VV42 579 aa17.39■□□□□ 0.38
RER1-203ENST00000378513 SLC35F6Q8N357 371 aa17.39■□□□□ 0.38
RER1-203ENST00000378513 FERMT2Q96AC1 680 aa17.39■□□□□ 0.38
RER1-203ENST00000378513 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.38
RER1-203ENST00000378513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.385e-6■■■□□ 15.8
RER1-203ENST00000378513 EFCAB8A8MWE9 144 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 FILIP1LQ4L180 1135 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 FBXO33Q7Z6M2 555 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 ENC1O14682 589 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 UBXN1Q04323 297 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 NFIXQ14938 502 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 CALCOCO1Q9P1Z2 691 aa17.39■□□□□ 0.37
RER1-203ENST00000378513 ST5P78524 1137 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 CERS3Q8IU89 383 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 ARGLU1Q9NWB6 273 aaPredicted RBP17.38■□□□□ 0.37
RER1-203ENST00000378513 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 KCNJ18B7U540 433 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
RER1-203ENST00000378513 KRT9P35527 623 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 KLK7P49862 253 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 PAK1Q13153 545 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 KCNJ12Q14500 433 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 PFKFB3Q16875 520 aaPredicted RBP17.38■□□□□ 0.37
RER1-203ENST00000378513 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
RER1-203ENST00000378513 CYTH3O43739 400 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 COPB1P53618 953 aaKnown RBP17.37■□□□□ 0.37
RER1-203ENST00000378513 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
RER1-203ENST00000378513 SKIDA1Q1XH10 827 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 DDAH1O94760 285 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 ZRANB2O95218 330 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■■□ 21
RER1-203ENST00000378513 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 CCDC194A0A1B0GVG4 234 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
RER1-203ENST00000378513 MCM6Q14566 821 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms