RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 EFCAB8A8MWE9 144 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 UNC13BO14795 1591 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 CFBP00751 764 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 KRT5P13647 590 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 PSMB7Q99436 277 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 MRPL44Q9H9J2 332 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 NPHP4O75161 1426 aaPredicted RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 GCNT3O95395 438 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 TECP42680 631 aa12.53□□□□□ -0.4
RPGR-203ENST00000378505 CRKLP46109 303 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 NCBP1Q09161 790 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 PUS7LQ9H0K6 701 aaKnown RBP12.53□□□□□ -0.4
RPGR-203ENST00000378505 NDUFAB1O14561 156 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 LIFRP42702 1097 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 USH1GQ495M9 461 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 PI16Q6UXB8 463 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 C11orf57Q6ZUT1 292 aaPredicted RBP12.52□□□□□ -0.4
RPGR-203ENST00000378505 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 FTOQ9C0B1 505 aaKnown RBP eCLIP12.52□□□□□ -0.4
RPGR-203ENST00000378505 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.4
RPGR-203ENST00000378505 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.4
RPGR-203ENST00000378505 ZNF804BA4D1E1 1349 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 H0YIN7 160 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
RPGR-203ENST00000378505 IGKV5-2P06315 115 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 SND1Q7KZF4 910 aaKnown RBP eCLIP12.52□□□□□ -0.41
RPGR-203ENST00000378505 SYCE1Q8N0S2 351 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
RPGR-203ENST00000378505 CCDC114Q96M63 670 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
RPGR-203ENST00000378505 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
RPGR-203ENST00000378505 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.41
RPGR-203ENST00000378505 KCNK9Q9NPC2 374 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 ERVV-1B6SEH8 477 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 SH2B2O14492 632 aaPredicted RBP12.52□□□□□ -0.41
RPGR-203ENST00000378505 BCRP11274 1271 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
RPGR-203ENST00000378505 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
RPGR-203ENST00000378505 OAS2P29728 719 aaKnown RBP12.51□□□□□ -0.41
RPGR-203ENST00000378505 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 IPO4Q8TEX9 1081 aaKnown RBP12.51□□□□□ -0.41
RPGR-203ENST00000378505 MAGEF1Q9HAY2 307 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 EPN1Q9Y6I3 576 aaPredicted RBP12.51□□□□□ -0.41
RPGR-203ENST00000378505 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 HPDP32754 393 aaPredicted RBP12.51□□□□□ -0.41
RPGR-203ENST00000378505 CROCCP2Q86T23 111 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 UIMC1Q96RL1 719 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 GPIHBP1Q8IV16 184 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 CHURC1Q8WUH1 139 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
RPGR-203ENST00000378505 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
RPGR-203ENST00000378505 KLHL7Q8IXQ5 586 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 ARMCX3Q9UH62 379 aaPredicted RBP12.5□□□□□ -0.41
RPGR-203ENST00000378505 RNF17Q9BXT8 1623 aaKnown RBP12.5□□□□□ -0.41
RPGR-203ENST00000378505 COPB1P53618 953 aaKnown RBP12.5□□□□□ -0.41
RPGR-203ENST00000378505 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 CPXCR1Q8N123 301 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 MMP1P03956 469 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 POLD1P28340 1107 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 ATP5DP30049 168 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 BTDP43251 543 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 CLUL1Q15846 466 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 EPHA10Q5JZY3 1008 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 CEP128Q6ZU80 1094 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
RPGR-203ENST00000378505 MED14O60244 1454 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 LAD1O00515 517 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 STAT1P42224 750 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 CCDC6Q16204 474 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
RPGR-203ENST00000378505 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms