RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 COL11A1P12107 1806 aaPredicted RBP23.61■■□□□ 1.37
CCDC107-202ENST00000378406 SMCHD1A6NHR9 2005 aa23.61■■□□□ 1.37
CCDC107-202ENST00000378406 APBB1O00213 710 aa23.61■■□□□ 1.37
CCDC107-202ENST00000378406 WDR46O15213 610 aaKnown RBP23.61■■□□□ 1.37
CCDC107-202ENST00000378406 ADAMTS5Q9UNA0 930 aa23.61■■□□□ 1.37
CCDC107-202ENST00000378406 EYSQ5T1H1 3165 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 CYP2D7A0A087X1C5 515 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 TRIM43BA6NCK2 446 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 MBD4O95243 580 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 IFIT2P09913 472 aaKnown RBP23.6■■□□□ 1.37
CCDC107-202ENST00000378406 ADD2P35612 726 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 C12orf60Q5U649 245 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 SAMD1Q6SPF0 538 aaPredicted RBP23.6■■□□□ 1.37
CCDC107-202ENST00000378406 TRIM43Q96BQ3 446 aaPredicted RBP23.6■■□□□ 1.37
CCDC107-202ENST00000378406 CCDC17Q96LX7 622 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 CDX2Q99626 313 aaPredicted RBP23.6■■□□□ 1.37
CCDC107-202ENST00000378406 ATP8A2Q9NTI2 1148 aa23.6■■□□□ 1.37
CCDC107-202ENST00000378406 SLC25A27O95847 323 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 CDK8P49336 464 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 FBXO28Q9NVF7 368 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 PAG1Q9NWQ8 432 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 NRBP1Q9UHY1 535 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 PHF24Q9UPV7 400 aa23.59■■□□□ 1.37
CCDC107-202ENST00000378406 RIOX2Q8IUF8 465 aa23.58■■□□□ 1.37
CCDC107-202ENST00000378406 SIRT2Q8IXJ6 389 aa23.58■■□□□ 1.37
CCDC107-202ENST00000378406 MMP19Q99542 508 aa23.58■■□□□ 1.37
CCDC107-202ENST00000378406 SEMA6BQ9H3T3 888 aa23.58■■□□□ 1.37
CCDC107-202ENST00000378406 USP17L12C9JPN9 530 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 USP17L21D6R901 530 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 CHGBP05060 677 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 PGK2P07205 417 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 EEF2P13639 858 aaKnown RBP23.57■■□□□ 1.36
CCDC107-202ENST00000378406 TLE2Q04725 743 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 C16orf86Q6ZW13 317 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 BCL11AQ9H165 835 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 BOLA2Q9H3K6 86 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 XPNPEP3Q9NQH7 507 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 PLXNA1Q9UIW2 1896 aa23.57■■□□□ 1.36
CCDC107-202ENST00000378406 RARBP10826 455 aa23.56■■□□□ 1.36
CCDC107-202ENST00000378406 TAL1P17542 331 aaPredicted RBP23.56■■□□□ 1.36
CCDC107-202ENST00000378406 ITGB8P26012 769 aa23.56■■□□□ 1.36
CCDC107-202ENST00000378406 SMAD3P84022 425 aaKnown RBP23.56■■□□□ 1.36
CCDC107-202ENST00000378406 ZNF792Q3KQV3 632 aa23.56■■□□□ 1.36
CCDC107-202ENST00000378406 RPAP2Q8IXW5 612 aaPredicted RBP23.56■■□□□ 1.36
CCDC107-202ENST00000378406 TINF2Q9BSI4 451 aa23.56■■□□□ 1.36
CCDC107-202ENST00000378406 ROBO3Q96MS0 1386 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 VWA5AO00534 786 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 PGK1P00558 417 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 ATP5JP18859 108 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 TTYH1Q9H313 450 aaPredicted RBP23.55■■□□□ 1.36
CCDC107-202ENST00000378406 KANSL2Q9H9L4 492 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 ZNF214Q9UL59 606 aaPredicted RBP23.55■■□□□ 1.36
CCDC107-202ENST00000378406 PPP1R9AQ9ULJ8 1098 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
CCDC107-202ENST00000378406 TACC3Q9Y6A5 838 aa23.55■■□□□ 1.36
CCDC107-202ENST00000378406 RAB11FIP3O75154 756 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 HMMRO75330 724 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 STAT3P40763 770 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 KCTD2Q14681 263 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 RNF180Q86T96 592 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 AMOTL1Q8IY63 956 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 REPS2Q8NFH8 660 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 HAUS7Q99871 368 aa23.54■■□□□ 1.36
CCDC107-202ENST00000378406 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCDC107-202ENST00000378406 MYH7P12883 1935 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 PRUNE2Q8WUY3 3088 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 A0A1W2PQ45 241 aaPredicted RBP23.53■■□□□ 1.36
CCDC107-202ENST00000378406 A0A1W2PQY0 241 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 CLTBP09497 229 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 ZNF865P0CJ78 1059 aaPredicted RBP23.53■■□□□ 1.36
CCDC107-202ENST00000378406 EPHB4P54760 987 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 UBE3CQ15386 1083 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 MAFAQ8NHW3 353 aaPredicted RBP23.53■■□□□ 1.36
CCDC107-202ENST00000378406 GOPCQ9HD26 462 aa23.53■■□□□ 1.36
CCDC107-202ENST00000378406 SUPT16HQ9Y5B9 1047 aaKnown RBP23.53■■□□□ 1.36
CCDC107-202ENST00000378406 KIAA0355O15063 1070 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 FAM83BQ5T0W9 1011 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 CTR9Q6PD62 1173 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 MYLIPQ8WY64 445 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 LENG1Q96BZ8 264 aaPredicted RBP23.52■■□□□ 1.36
CCDC107-202ENST00000378406 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.52■■□□□ 1.36
CCDC107-202ENST00000378406 ZBTB40Q9NUA8 1239 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
CCDC107-202ENST00000378406 GREB1LQ9C091 1923 aaPredicted RBP23.51■■□□□ 1.35
CCDC107-202ENST00000378406 AKR1A1P14550 325 aa23.51■■□□□ 1.35
CCDC107-202ENST00000378406 COPB2P35606 906 aa23.51■■□□□ 1.35
CCDC107-202ENST00000378406 RRP1P56182 461 aaKnown RBP23.51■■□□□ 1.35
CCDC107-202ENST00000378406 DDRGK1Q96HY6 314 aa23.51■■□□□ 1.35
CCDC107-202ENST00000378406 VCANP13611 3396 aa23.5■■□□□ 1.35
CCDC107-202ENST00000378406 PQBP1O60828 265 aaKnown RBP23.5■■□□□ 1.35
CCDC107-202ENST00000378406 ADAMTS4O75173 837 aa23.5■■□□□ 1.35
CCDC107-202ENST00000378406 MS4A1P11836 297 aa23.5■■□□□ 1.35
CCDC107-202ENST00000378406 RNPC3Q96LT9 517 aaKnown RBP23.5■■□□□ 1.35
CCDC107-202ENST00000378406 PUS7LQ9H0K6 701 aaKnown RBP23.5■■□□□ 1.35
CCDC107-202ENST00000378406 CDH23Q9H251 3354 aa23.5■■□□□ 1.35
CCDC107-202ENST00000378406 RAD21O60216 631 aa23.49■■□□□ 1.35
CCDC107-202ENST00000378406 RAG1P15918 1043 aa23.49■■□□□ 1.35
CCDC107-202ENST00000378406 DDX19BQ9UMR2 479 aa23.49■■□□□ 1.35
CCDC107-202ENST00000378406 CNPY2Q9Y2B0 182 aa23.49■■□□□ 1.35
CCDC107-202ENST00000378406 COG6Q9Y2V7 657 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms