RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
TDP2-202ENST00000378198 TERF2Q15554 542 aa20.59■□□□□ 0.89
TDP2-202ENST00000378198 RRAGBQ5VZM2 374 aa20.59■□□□□ 0.89
TDP2-202ENST00000378198 TBC1D9BQ66K14 1250 aa20.59■□□□□ 0.89
TDP2-202ENST00000378198 ZNF771Q7L3S4 317 aaPredicted RBP20.59■□□□□ 0.89
TDP2-202ENST00000378198 BAZ2BQ9UIF8 2168 aaKnown RBP20.59■□□□□ 0.89
TDP2-202ENST00000378198 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 ATP8B1O43520 1251 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 LONP1P36776 959 aaKnown RBP20.58■□□□□ 0.89
TDP2-202ENST00000378198 EVX2Q03828 476 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 MTF1Q14872 753 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 KARSQ15046 597 aaKnown RBP20.58■□□□□ 0.89
TDP2-202ENST00000378198 GPR161Q8N6U8 529 aaKnown RBP20.58■□□□□ 0.89
TDP2-202ENST00000378198 CPLX3Q8WVH0 158 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 STAMQ92783 540 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
TDP2-202ENST00000378198 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
TDP2-202ENST00000378198 IGSF3O75054 1194 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 PNMA6AP0CW24 399 aaPredicted RBP20.58■□□□□ 0.88
TDP2-202ENST00000378198 CYP2D6P10635 497 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 PRDX5P30044 214 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 IL17AQ16552 155 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 ZNF658Q5TYW1 1059 aaPredicted RBP20.58■□□□□ 0.88
TDP2-202ENST00000378198 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.88
TDP2-202ENST00000378198 RCSD1Q6JBY9 416 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 RAD9BQ6WBX8 426 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.88
TDP2-202ENST00000378198 BLZF1Q9H2G9 400 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 KAT14Q9H8E8 782 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 TFCP2L1Q9NZI6 479 aa20.58■□□□□ 0.88
TDP2-202ENST00000378198 FECHP22830 423 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 TXLNAP40222 546 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 RSRC2Q7L4I2 434 aaKnown RBP20.57■□□□□ 0.88
TDP2-202ENST00000378198 DGKHQ86XP1 1220 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 BLIDQ8IZY5 108 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 ANKRD20A12PQ8NF67 263 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 CASP14P31944 242 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 PAK1Q13153 545 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 RASGRP2Q7LDG7 609 aa20.57■□□□□ 0.88
TDP2-202ENST00000378198 KRT31Q15323 416 aa20.56■□□□□ 0.88
TDP2-202ENST00000378198 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
TDP2-202ENST00000378198 MTRQ99707 1265 aa20.56■□□□□ 0.88
TDP2-202ENST00000378198 PCDHA4Q9UN74 947 aa20.56■□□□□ 0.88
TDP2-202ENST00000378198 N4BP3O15049 544 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 GYPCP04921 128 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 TRIM14Q14142 442 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 CREBRFQ8IUR6 639 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 C4orf32Q8N8J7 132 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 RABGGTAQ92696 567 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 MCM9Q9NXL9 1143 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 MYH1P12882 1939 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 KIF5CO60282 957 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 RPN1P04843 607 aaKnown RBP20.55■□□□□ 0.88
TDP2-202ENST00000378198 VEGFAP15692 232 aaPredicted RBP20.55■□□□□ 0.88
TDP2-202ENST00000378198 GNAQP50148 359 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 DZIP1Q86YF9 867 aaKnown RBP20.55■□□□□ 0.88
TDP2-202ENST00000378198 TMTC1Q8IUR5 882 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 GOLGA1Q92805 767 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 LZTFL1Q9NQ48 299 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 NARFQ9UHQ1 456 aa20.55■□□□□ 0.88
TDP2-202ENST00000378198 COPB1P53618 953 aaKnown RBP20.54■□□□□ 0.88
TDP2-202ENST00000378198 TFAP4Q01664 338 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 TUBB2AQ13885 445 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 NELFBQ8WX92 580 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 TUBB2BQ9BVA1 445 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 TTF2Q9UNY4 1162 aaKnown RBP20.54■□□□□ 0.88
TDP2-202ENST00000378198 CCT6AP40227 531 aaKnown RBP20.54■□□□□ 0.88
TDP2-202ENST00000378198 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
TDP2-202ENST00000378198 GRM4Q14833 912 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 TCP11X2Q5H9J9 407 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 TEX35Q5T0J7 233 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 C12orf60Q5U649 245 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 NBPF5PQ86XG9 351 aaPredicted RBP20.54■□□□□ 0.88
TDP2-202ENST00000378198 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
TDP2-202ENST00000378198 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 ADAMTS3O15072 1205 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 STAT6P42226 847 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 PLA2G4AP47712 749 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 NAV1Q8NEY1 1877 aa20.53■□□□□ 0.88
TDP2-202ENST00000378198 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 H7C1D1 291 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 SEMA3FQ13275 785 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 GALNT17Q6IS24 598 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 IRX2Q9BZI1 471 aaPredicted RBP20.52■□□□□ 0.88
TDP2-202ENST00000378198 VPS16Q9H269 839 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 MKRN1Q9UHC7 482 aaKnown RBP20.52■□□□□ 0.88
TDP2-202ENST00000378198 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.88
TDP2-202ENST00000378198 M0R2N6 131 aa20.52■□□□□ 0.87
TDP2-202ENST00000378198 USP5P45974 858 aa20.52■□□□□ 0.87
TDP2-202ENST00000378198 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.87
TDP2-202ENST00000378198 WWC2Q6AWC2 1192 aa20.52■□□□□ 0.87
TDP2-202ENST00000378198 CC2D1AQ6P1N0 951 aaPredicted RBP20.52■□□□□ 0.87
TDP2-202ENST00000378198 TPTE2Q6XPS3 522 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms