RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 CCDC122Q5T0U0 273 aa11.94□□□□□ -0.5
ZNF549-202ENST00000376233 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
ZNF549-202ENST00000376233 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
ZNF549-202ENST00000376233 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
ZNF549-202ENST00000376233 MAP3K14Q99558 947 aa11.94□□□□□ -0.5
ZNF549-202ENST00000376233 CUL4BQ13620 913 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 INTS5Q6P9B9 1019 aaKnown RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 PP2D1A8MPX8 630 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 NTSR2O95665 410 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 TECP42680 631 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 ARID5AQ03989 594 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 CCDC40Q4G0X9 1142 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 TRMT1LQ7Z2T5 733 aaKnown RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 GSDMAQ96QA5 445 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 RUFY1Q96T51 708 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 EYA3Q99504 573 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 HINFPQ9BQA5 517 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 FRMPD2Q68DX3 1309 aaPredicted RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 PNPLA7Q6ZV29 1317 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 CLCN6P51797 869 aa11.93□□□□□ -0.5
ZNF549-202ENST00000376233 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
ZNF549-202ENST00000376233 SMCO2A6NFE2 343 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 GNA11P29992 359 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 RAD51AP2Q09MP3 1159 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 MFSD14BQ5SR56 506 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 CABP7Q86V35 215 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 ANKRD7Q92527 254 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 MYO1BO43795 1136 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 WDR24Q96S15 920 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 PSMB7Q99436 277 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZNF549-202ENST00000376233 HPSEQ9Y251 543 aa11.92□□□□□ -0.5
ZNF549-202ENST00000376233 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 ST5P78524 1137 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 RIC1Q4ADV7 1423 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 LEKR1Q6ZMV7 388 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 CCDC42Q96M95 316 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 GDAP1L1Q96MZ0 367 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 ZNF76P36508 570 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 COPB1P53618 953 aaKnown RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 CYP26C1Q6V0L0 522 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 ST7Q9NRC1 585 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 BTDP43251 543 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 TMTC1Q8IUR5 882 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
ZNF549-202ENST00000376233 TSG101Q99816 390 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 TBC1D7Q9P0N9 293 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
ZNF549-202ENST00000376233 ENC1O14682 589 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 USO1O60763 962 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 GTF2IP78347 998 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 KRT31Q15323 416 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 TCERG1LQ5VWI1 586 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 FAM114A1Q8IWE2 563 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 CRACR2AQ9BSW2 395 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 GGA1Q9UJY5 639 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 EVX2Q03828 476 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 ZC3H12CQ9C0D7 883 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.5
ZNF549-202ENST00000376233 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
ZNF549-202ENST00000376233 LMO7Q8WWI1 1683 aa11.9□□□□□ -0.51
ZNF549-202ENST00000376233 ZNF622Q969S3 477 aaKnown RBP eCLIP11.9□□□□□ -0.51
ZNF549-202ENST00000376233 GBP3Q9H0R5 595 aa11.9□□□□□ -0.51
ZNF549-202ENST00000376233 LRWD1Q9UFC0 647 aa11.9□□□□□ -0.51
ZNF549-202ENST00000376233 CHD2O14647 1828 aaKnown RBP11.89□□□□□ -0.51
ZNF549-202ENST00000376233 FAM170AA1A519 330 aa11.89□□□□□ -0.51
ZNF549-202ENST00000376233 TOM1O60784 492 aa11.89□□□□□ -0.51
ZNF549-202ENST00000376233 DMTNQ08495 405 aa11.89□□□□□ -0.51
ZNF549-202ENST00000376233 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms