RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 MTHFSDQ2M296 383 aaKnown RBP10.8□□□□□ -0.68
SPEN-201ENST00000375759 TBC1D7Q9P0N9 293 aa10.8□□□□□ -0.68
SPEN-201ENST00000375759 UGGT2Q9NYU1 1516 aa10.8□□□□□ -0.68
SPEN-201ENST00000375759 KRT40Q6A162 431 aa10.8□□□□□ -0.68
SPEN-201ENST00000375759 CABP7Q86V35 215 aa10.8□□□□□ -0.68
SPEN-201ENST00000375759 TSPYL6Q8N831 410 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 NOP56O00567 594 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 PPARDQ03181 441 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 SF3A3Q12874 501 aaKnown RBP eCLIP10.79□□□□□ -0.68
SPEN-201ENST00000375759 EIF3CLB5ME19 914 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 CXorf38Q8TB03 319 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 EIF3CQ99613 913 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 BZW2Q9Y6E2 419 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 KIF24Q5T7B8 1368 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 EYA2O00167 538 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 LMNB2Q03252 620 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 PKD2L1Q9P0L9 805 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 ANKRD20A4Q4UJ75 823 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 ANKRD20A8PQ5CZ79 823 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 ANKRD20A2Q5SQ80 823 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 ANKRD20A1Q5TYW2 823 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 LRGUKQ96M69 825 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 MIS12Q9H081 205 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 IFNB1P01574 187 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 CCT5P48643 541 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 NSFL1CQ9UNZ2 370 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 BRDTQ58F21 947 aaPredicted RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 DACT3Q96B18 629 aaPredicted RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 DESI2Q9BSY9 194 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 NLRC4Q9NPP4 1024 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 RRP15Q9Y3B9 282 aaKnown RBP10.79□□□□□ -0.68
SPEN-201ENST00000375759 TTC4O95801 387 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
SPEN-201ENST00000375759 GSTA1P08263 222 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 GSTA2P09210 222 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 HOXB7P09629 217 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 ATF2P15336 505 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 PHEXP78562 749 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 PLCB4Q15147 1175 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 FAM227BQ96M60 508 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 TTLL3Q9Y4R7 772 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 U2AF1L4Q8WU68 220 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 MX2P20592 715 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 IFT88Q13099 833 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 DYMQ7RTS9 669 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 ORC6Q9Y5N6 252 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 PFDN6O15212 129 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 SPDL1Q96EA4 605 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 METTL22Q9BUU2 404 aaPredicted RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 NACA2Q9H009 215 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 MAST3O60307 1309 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 TRPM2O94759 1503 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 HADHQ16836 314 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 ARMT1Q9H993 441 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 CNOT10Q9H9A5 744 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 SAP30BPQ9UHR5 308 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 PHLPP2Q6ZVD8 1323 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 FAM173BQ6P4H8 233 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 ZNF274Q96GC6 653 aaPredicted RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 TXLNGQ9NUQ3 528 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 INTS9Q9NV88 658 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 CD19P15391 556 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 FBXO41Q8TF61 875 aa10.78□□□□□ -0.68
SPEN-201ENST00000375759 DENND4BO75064 1496 aaPredicted RBP10.78□□□□□ -0.68
SPEN-201ENST00000375759 PFKFB1P16118 471 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 SLC1A4P43007 532 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 PDZD4Q76G19 769 aaPredicted RBP10.77□□□□□ -0.68
SPEN-201ENST00000375759 XAGE2Q96GT9 111 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 STAM2O75886 525 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 TNNI1P19237 187 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 ABCB4P21439 1286 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 FBLN1P23142 703 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 MCTP2Q6DN12 878 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 TUBB6Q9BUF5 446 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 BLZF1Q9H2G9 400 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 PICK1Q9NRD5 415 aa10.77□□□□□ -0.68
SPEN-201ENST00000375759 ARHGAP44Q17R89 818 aa10.77□□□□□ -0.69
SPEN-201ENST00000375759 SCOCQ9UIL1 159 aa10.77□□□□□ -0.69
SPEN-201ENST00000375759 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
SPEN-201ENST00000375759 GCC2Q8IWJ2 1684 aa10.77□□□□□ -0.69
SPEN-201ENST00000375759 EPN1Q9Y6I3 576 aaPredicted RBP10.77□□□□□ -0.69
SPEN-201ENST00000375759 IL2RBP14784 551 aa10.77□□□□□ -0.69
SPEN-201ENST00000375759 PDE6CP51160 858 aa10.77□□□□□ -0.69
SPEN-201ENST00000375759 OTUD6AQ7L8S5 288 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms