RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FBXL16Q8N461 479 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 MED15Q96RN5 788 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 DEF6Q9H4E7 631 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
MSH5-204ENST00000375755 MAN1B1Q9UKM7 699 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 CPLX1O14810 134 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 TDO2P48775 406 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 NR1I3Q14994 352 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 TXNRD1Q16881 649 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 NOA1Q8NC60 698 aaKnown RBP14.61□□□□□ -0.07
MSH5-204ENST00000375755 ZSWIM5Q9P217 1185 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 ANKIB1Q9P2G1 1089 aa14.61□□□□□ -0.07
MSH5-204ENST00000375755 RNF40O75150 1001 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 ABL1P00519 1130 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 MDM2Q00987 491 aaPredicted RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 GRIK5Q16478 980 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 EFCAB13Q8IY85 973 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 PANX2Q96RD6 677 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 MED4Q9NPJ6 270 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 KCNH3Q9ULD8 1083 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 CTAGE9A4FU28 777 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 TEX33O43247 280 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 SERPINB2P05120 415 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 HIBADHP31937 336 aaKnown RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 SKIDA1Q1XH10 827 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 TADA2BQ86TJ2 420 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 SUGP1Q8IWZ8 645 aaKnown RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 CPLX3Q8WVH0 158 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 CTAGE15A4D2H0 777 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 SYF2O95926 243 aaKnown RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 CTAGE8P0CG41 777 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 SPECC1Q5M775 1068 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 CTAGE6Q86UF2 777 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 CTAGE4Q8IX94 777 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
MSH5-204ENST00000375755 ENOX1Q8TC92 643 aaKnown RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 GNL3LQ9NVN8 582 aaKnown RBP14.6□□□□□ -0.07
MSH5-204ENST00000375755 MECOMQ03112 1051 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 RBL2Q08999 1139 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 TRDNQ13061 729 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 RIOK1Q9BRS2 568 aaKnown RBP14.59□□□□□ -0.07
MSH5-204ENST00000375755 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
MSH5-204ENST00000375755 IRS2Q9Y4H2 1338 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 MAGEB6P1A0A0J9YX57 407 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 TUBB2AQ13885 445 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 DNAJC21Q5F1R6 531 aaKnown RBP14.59□□□□□ -0.07
MSH5-204ENST00000375755 AFAP1L1Q8TED9 768 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 TUBB2BQ9BVA1 445 aa14.59□□□□□ -0.07
MSH5-204ENST00000375755 A0A1B0GTH6 734 aa14.58□□□□□ -0.07
MSH5-204ENST00000375755 SH2B2O14492 632 aaPredicted RBP14.58□□□□□ -0.07
MSH5-204ENST00000375755 RGL2O15211 777 aa14.58□□□□□ -0.07
MSH5-204ENST00000375755 PRPF6O94906 941 aaKnown RBP14.58□□□□□ -0.07
MSH5-204ENST00000375755 MICU3Q86XE3 530 aa14.58□□□□□ -0.07
MSH5-204ENST00000375755 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.07
MSH5-204ENST00000375755 IGDCC4Q8TDY8 1250 aa14.58□□□□□ -0.07
MSH5-204ENST00000375755 AATFQ9NY61 560 aaKnown RBP eCLIP14.58□□□□□ -0.07
MSH5-204ENST00000375755 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
MSH5-204ENST00000375755 TUBB4BP68371 445 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 GRAPQ13588 217 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 GRAPLQ8TC17 118 aaPredicted RBP14.58□□□□□ -0.08
MSH5-204ENST00000375755 NSUN4Q96CB9 384 aaKnown RBP14.58□□□□□ -0.08
MSH5-204ENST00000375755 ALG1Q9BT22 464 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.08
MSH5-204ENST00000375755 GPSM2P81274 684 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 ALX1Q15699 326 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 KRT40Q6A162 431 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 ACRBPQ8NEB7 543 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 PHKBQ93100 1093 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 LY9Q9HBG7 655 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 PRDM1O75626 825 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 AARSP49588 968 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■■■ 67
MSH5-204ENST00000375755 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 APTXQ7Z2E3 356 aaKnown RBP14.57□□□□□ -0.08
MSH5-204ENST00000375755 CMTR1Q8N1G2 835 aaKnown RBP14.57□□□□□ -0.08
MSH5-204ENST00000375755 IGSF22Q8N9C0 903 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 KAT2BQ92831 832 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 NAPGQ99747 312 aaPredicted RBP14.57□□□□□ -0.08
MSH5-204ENST00000375755 ANGEL1Q9UNK9 670 aaKnown RBP14.57□□□□□ -0.08
MSH5-204ENST00000375755 RXRBP28702 533 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 POSTNQ15063 836 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 AKNAD1Q5T1N1 836 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 NCAPH2Q6IBW4 605 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 GRAMD1CQ8IYS0 662 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 MLKLQ8NB16 471 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
MSH5-204ENST00000375755 MYH2Q9UKX2 1941 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 MMP14P50281 582 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 MORC3Q14149 939 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 SWT1Q5T5J6 900 aaKnown RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 WDR93Q6P2C0 686 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 PPFIBP1Q86W92 1011 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 RIN2Q8WYP3 895 aaPredicted RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms