RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VSNL1P62760 191 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 ERVK-24P63145 666 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 HDXQ7Z353 690 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 VPS16Q9H269 839 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 BLZF1Q9H2G9 400 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 L1RE1Q9UN81 338 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 CTNND2Q9UQB3 1225 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 ERICH2A1L162 156 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 TRIM66O15016 1216 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 ZNF174Q15697 407 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 FILIP1LQ4L180 1135 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 MSANTD4Q8NCY6 345 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 HNRNPLLQ8WVV9 542 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 TRIM34Q9BYJ4 488 aa15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 AATFQ9NY61 560 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 GOLGB1Q14789 3259 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-202ENST00000375692 NOA1Q8NC60 698 aaKnown RBP15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 FAN1Q9Y2M0 1017 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 PHACTR2O75167 634 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 USP5P45974 858 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 STAG1Q8WVM7 1258 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 LPIN2Q92539 896 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 SLF1Q9BQI6 1058 aa15.97■□□□□ 0.15
CLCNKA-202ENST00000375692 MINDY4BA8MYZ0 360 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 NFIXQ14938 502 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 KRT31Q15323 416 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 CCDC196A0A1B0GTZ2 297 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 N4BP3O15049 544 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 ARHGAP25P42331 645 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 PKN1Q16512 942 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 CNGA4Q8IV77 575 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 C10orf67Q8IYJ2 551 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 GOLGA5Q8TBA6 731 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 CTAGE1Q96RT6 745 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 PSD3Q9NYI0 1048 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 TRIM10Q9UDY6 481 aa15.96■□□□□ 0.15
CLCNKA-202ENST00000375692 PLSCR1O15162 318 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 FGFR2P21802 821 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 FOXR1Q6PIV2 292 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 MAPK8IP1Q9UQF2 711 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 V9GY48 417 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 NID2Q14112 1375 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 CTAGE15A4D2H0 777 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 CTAGE8P0CG41 777 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 ACTN2P35609 894 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 CTAGE6Q86UF2 777 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 CTAGE4Q8IX94 777 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 GSDMAQ96QA5 445 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 NUP88Q99567 741 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 ABHD10Q9NUJ1 306 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 TTF2Q9UNY4 1162 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-202ENST00000375692 ERLIN1O75477 346 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 GYS1P13807 737 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 BCAMP50895 628 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 CASP8Q14790 479 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 RRAGBQ5VZM2 374 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 SDR42E1Q8WUS8 393 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 CHP1Q99653 195 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 MYH8P13535 1937 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 MYO1CO00159 1063 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 KRT2P35908 639 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 TMTC1Q8IUR5 882 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 CCDC102AQ96A19 550 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 TFR2Q9UP52 801 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 IQSEC3Q9UPP2 1182 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 TNKSO95271 1327 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 XDHP47989 1333 aa15.94■□□□□ 0.14
CLCNKA-202ENST00000375692 BCORQ6W2J9 1755 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 WTIPA6NIX2 430 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 LRRIQ3A6PVS8 624 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 SLC20A2Q08357 652 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 TMTC2Q8N394 836 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 PHF20Q9BVI0 1012 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 COL4A1P02462 1669 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 ENC1O14682 589 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 KRT9P35527 623 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 PPARAQ07869 468 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 PTGDRQ13258 359 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 MTRQ99707 1265 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 HDAC6Q9UBN7 1215 aa15.93■□□□□ 0.14
CLCNKA-202ENST00000375692 GUCA1BQ9UMX6 200 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms