RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
HSPG2-202ENST00000374676 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
HSPG2-202ENST00000374676 RAD21O60216 631 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 TLR2O60603 784 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 PLA2G6O60733 806 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 CYP2C8P10632 490 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 SLC1A4P43007 532 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 GCLCP48506 637 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-202ENST00000374676 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
HSPG2-202ENST00000374676 CRHR2Q13324 411 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 RUFY3Q7L099 469 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-202ENST00000374676 AGXT2Q9BYV1 514 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 SENP2Q9HC62 589 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 MYPNQ86TC9 1320 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 ADGRA2Q96PE1 1338 aa13.31□□□□□ -0.28
HSPG2-202ENST00000374676 TBC1D8O95759 1140 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 PDHBP11177 359 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 CPA1P15085 419 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 DSG3P32926 999 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 HERVK_113P62684 666 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 TROAPQ12815 778 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 C17orf99Q6UX52 265 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-202ENST00000374676 LRRC2Q9BYS8 371 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 R3HDMLQ9H3Y0 253 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-202ENST00000374676 ADAMTS5Q9UNA0 930 aa13.3□□□□□ -0.28
HSPG2-202ENST00000374676 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 TMEM232C9JQI7 657 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 FLOT1O75955 427 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 BCRP11274 1271 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 ZNF543Q08ER8 600 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 Q6ZUG5 572 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 CATIPQ7Z7H3 387 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 SMCR8Q8TEV9 937 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 SLF1Q9BQI6 1058 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
HSPG2-202ENST00000374676 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
HSPG2-202ENST00000374676 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-202ENST00000374676 GPR25O00155 361 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 DDAH1O94760 285 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 FDX1P10109 184 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 STAT2P52630 851 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 FGD1P98174 961 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 GRM4Q14833 912 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 ASPRV1Q53RT3 343 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 NFXL1Q6ZNB6 911 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
HSPG2-202ENST00000374676 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 RBPJLQ9UBG7 517 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 MORF4L1Q9UBU8 362 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 MTMR7Q9Y216 660 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 RABGAP1Q9Y3P9 1069 aa13.28□□□□□ -0.28
HSPG2-202ENST00000374676 PALM3A6NDB9 673 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-202ENST00000374676 FOXN1O15353 648 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CALM1P0DP23 149 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CALM2P0DP24 149 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CALM3P0DP25 149 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CTCFP49711 727 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-202ENST00000374676 RCAN1P53805 252 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 EVCP57679 992 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 POTEEQ6S8J3 1075 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 SYNE3Q6ZMZ3 975 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 IL27Q8NEV9 243 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 ATG4CQ96DT6 458 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 KIF2CQ99661 725 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 PDRG1Q9NUG6 133 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-202ENST00000374676 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.29
HSPG2-202ENST00000374676 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms