RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FAM83BQ5T0W9 1011 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 DCAF4Q8WV16 495 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 TANGO6Q9C0B7 1094 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
HSPG2-201ENST00000374673 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 ADGRA2Q96PE1 1338 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 MYPNQ86TC9 1320 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 TLR2O60603 784 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 CPA1P15085 419 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 FBXL16Q8N461 479 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-201ENST00000374673 LRRC2Q9BYS8 371 aa17.59■□□□□ 0.41
HSPG2-201ENST00000374673 GPHNQ9NQX3 736 aaPredicted RBP17.59■□□□□ 0.41
HSPG2-201ENST00000374673 TBC1D8O95759 1140 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
HSPG2-201ENST00000374673 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
HSPG2-201ENST00000374673 COG2Q14746 738 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 LBX2Q6XYB7 198 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 GTF3C2Q8WUA4 911 aaPredicted RBP17.58■□□□□ 0.4
HSPG2-201ENST00000374673 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.4
HSPG2-201ENST00000374673 AGXT2Q9BYV1 514 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.4
HSPG2-201ENST00000374673 COL11A1P12107 1806 aaPredicted RBP17.58■□□□□ 0.4
HSPG2-201ENST00000374673 SPDYE16A6NNV3 312 aaPredicted RBP17.57■□□□□ 0.4
HSPG2-201ENST00000374673 PLA2G6O60733 806 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 FLOT1O75955 427 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 DSG3P32926 999 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 HERVK_113P62684 666 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 ZNF543Q08ER8 600 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 NOM1Q5C9Z4 860 aaKnown RBP17.57■□□□□ 0.4
HSPG2-201ENST00000374673 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
HSPG2-201ENST00000374673 R3HDMLQ9H3Y0 253 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 FEM1BQ9UK73 627 aa17.57■□□□□ 0.4
HSPG2-201ENST00000374673 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 DDAH1O94760 285 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-201ENST00000374673 STAT2P52630 851 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 TROAPQ12815 778 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 GPATCH4Q5T3I0 446 aaKnown RBP17.56■□□□□ 0.4
HSPG2-201ENST00000374673 C17orf99Q6UX52 265 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 Q6ZUG5 572 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 KCTD1Q719H9 257 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 FAM160B2Q86V87 743 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
HSPG2-201ENST00000374673 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 PPP1R9AQ9ULJ8 1098 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 ADAMTS5Q9UNA0 930 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 CEP350Q5VT06 3117 aa17.56■□□□□ 0.4
HSPG2-201ENST00000374673 TMEM232C9JQI7 657 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 BCRP11274 1271 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 ASPRV1Q53RT3 343 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 BTNL9Q6UXG8 535 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
HSPG2-201ENST00000374673 CHURC1Q8WUH1 139 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 MAP3K14Q99558 947 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 KIF2CQ99661 725 aa17.55■□□□□ 0.4
HSPG2-201ENST00000374673 FRMPD2Q68DX3 1309 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-201ENST00000374673 GPR25O00155 361 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 FOXN1O15353 648 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 PARP1P09874 1014 aaKnown RBP17.54■□□□□ 0.4
HSPG2-201ENST00000374673 FGD1P98174 961 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 GRM4Q14833 912 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 FAM110CQ1W6H9 321 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 POTEEQ6S8J3 1075 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 CHMP4CQ96CF2 233 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-201ENST00000374673 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 MORF4L1Q9UBU8 362 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 CPA4Q9UI42 421 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 TSKSQ9UJT2 592 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
HSPG2-201ENST00000374673 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 MGAMO43451 1857 aa17.54■□□□□ 0.4
HSPG2-201ENST00000374673 CALM1P0DP23 149 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 CALM2P0DP24 149 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 CALM3P0DP25 149 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 HSPA8P11142 646 aaKnown RBP17.53■□□□□ 0.4
HSPG2-201ENST00000374673 RCAN1P53805 252 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 TOB2Q14106 344 aaPredicted RBP17.53■□□□□ 0.4
HSPG2-201ENST00000374673 TTBK2Q6IQ55 1244 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 APOA5Q6Q788 366 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 ANKRD13CQ8N6S4 541 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 MB21D1Q8N884 522 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 BRF1Q92994 677 aa17.53■□□□□ 0.4
HSPG2-201ENST00000374673 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms