RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
TCEA3-201ENST00000374601 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
TCEA3-201ENST00000374601 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
TCEA3-201ENST00000374601 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
TCEA3-201ENST00000374601 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
TCEA3-201ENST00000374601 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 RAD21O60216 631 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 GOLGA8HP0CJ92 632 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
TCEA3-201ENST00000374601 USP14P54578 494 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 NTRK3Q16288 839 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
TCEA3-201ENST00000374601 RASAL3Q86YV0 1011 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 CTCFLQ8NI51 663 aaPredicted RBP16.35■□□□□ 0.21
TCEA3-201ENST00000374601 LPAR1Q92633 364 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
TCEA3-201ENST00000374601 CXCL11O14625 94 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 DTNBO60941 627 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 VCAM1P19320 739 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 KIF5BP33176 963 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 SLC1A4P43007 532 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 FUT2Q10981 343 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 MOGSQ13724 837 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 SPRYD7Q5W111 196 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 KCTD1Q719H9 257 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
TCEA3-201ENST00000374601 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
TCEA3-201ENST00000374601 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
TCEA3-201ENST00000374601 BMP3P12645 472 aa16.33■□□□□ 0.2
TCEA3-201ENST00000374601 APLP1P51693 650 aa16.33■□□□□ 0.2
TCEA3-201ENST00000374601 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
TCEA3-201ENST00000374601 RGMBQ6NW40 437 aa16.33■□□□□ 0.2
TCEA3-201ENST00000374601 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
TCEA3-201ENST00000374601 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
TCEA3-201ENST00000374601 NSUN7Q8NE18 718 aaKnown RBP16.33■□□□□ 0.2
TCEA3-201ENST00000374601 ABT1Q9ULW3 272 aaKnown RBP16.33■□□□□ 0.2
TCEA3-201ENST00000374601 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
TCEA3-201ENST00000374601 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 KLRF2D3W0D1 207 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 JAK2O60674 1132 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 SLC10A3P09131 477 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
TCEA3-201ENST00000374601 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 ZNF157P51786 506 aaPredicted RBP16.32■□□□□ 0.2
TCEA3-201ENST00000374601 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
TCEA3-201ENST00000374601 GPATCH4Q5T3I0 446 aaKnown RBP16.32■□□□□ 0.2
TCEA3-201ENST00000374601 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
TCEA3-201ENST00000374601 HHIPL1Q96JK4 782 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
TCEA3-201ENST00000374601 FAM155AB1AL88 458 aaPredicted RBP16.31■□□□□ 0.2
TCEA3-201ENST00000374601 CYTH3O43739 400 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 IFNAR1P17181 557 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 GNAQP50148 359 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 TREML2Q5T2D2 321 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
TCEA3-201ENST00000374601 SMARCC2Q8TAQ2 1214 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
TCEA3-201ENST00000374601 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 UBA5Q9GZZ9 404 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
TCEA3-201ENST00000374601 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
TCEA3-201ENST00000374601 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
TCEA3-201ENST00000374601 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 CPLX1O14810 134 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 DHX16O60231 1041 aaKnown RBP16.3■□□□□ 0.2
TCEA3-201ENST00000374601 SLC16A2P36021 539 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 GTF2A2P52657 109 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 GADL1Q6ZQY3 521 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 PHKBQ93100 1093 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
TCEA3-201ENST00000374601 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
TCEA3-201ENST00000374601 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 PLA2G6O60733 806 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 CDKL5O76039 1030 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
TCEA3-201ENST00000374601 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 STAT2P52630 851 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 GPAT2Q6NUI2 795 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
TCEA3-201ENST00000374601 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms