RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.3■□□□□ 0.84
PHF1-201ENST00000374512 ORC4O43929 436 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 NT5C2P49902 561 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 STX17P56962 302 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 SEMA3FQ13275 785 aa20.3■□□□□ 0.84
PHF1-201ENST00000374512 ARL6IP4Q66PJ3 421 aaKnown RBP20.3■□□□□ 0.84
PHF1-201ENST00000374512 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 GYPCP04921 128 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 CASP14P31944 242 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 DYNLL1P63167 89 aaKnown RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 SMC1AQ14683 1233 aaKnown RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 ZNF174Q15697 407 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 RC3H1Q5TC82 1133 aaKnown RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 FUT8Q9BYC5 575 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 LZTFL1Q9NQ48 299 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 CTAGE9A4FU28 777 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 WTIPA6NIX2 430 aaPredicted RBP20.29■□□□□ 0.84
PHF1-201ENST00000374512 SASH3O75995 380 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 GPS2Q13227 327 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
PHF1-201ENST00000374512 CNTNAP5Q8WYK1 1306 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 PRDM1O75626 825 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 USP5P45974 858 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 PDXDC2PQ6P474 469 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 CYP26C1Q6V0L0 522 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
PHF1-201ENST00000374512 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
PHF1-201ENST00000374512 RAB21Q9UL25 225 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 XDHP47989 1333 aa20.28■□□□□ 0.84
PHF1-201ENST00000374512 SMIM22K7EJ46 135 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 N4BP3O15049 544 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 KCNQ4P56696 695 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 PAK1Q13153 545 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 KRT31Q15323 416 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 ZNF658Q5TYW1 1059 aaPredicted RBP20.27■□□□□ 0.84
PHF1-201ENST00000374512 TXLNBQ8N3L3 684 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 CTNND2Q9UQB3 1225 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
PHF1-201ENST00000374512 BTAF1O14981 1849 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
PHF1-201ENST00000374512 SCG2P13521 617 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 CALML3P27482 149 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 LONP1P36776 959 aaKnown RBP20.27■□□□□ 0.84
PHF1-201ENST00000374512 CTR9Q6PD62 1173 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 FBXO33Q7Z6M2 555 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 ZNF384Q8TF68 577 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
PHF1-201ENST00000374512 CYP2D7A0A087X1C5 515 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 MAP2K7O14733 419 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 ERLIN1O75477 346 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 RPS6KA4O75676 772 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 FXR1P51114 621 aaKnown RBP eCLIP20.26■□□□□ 0.83
PHF1-201ENST00000374512 WHAMMP3Q1A5X7 153 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 LONRF2Q1L5Z9 754 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 RRAGBQ5VZM2 374 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 TBC1D9BQ66K14 1250 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 IRX2Q9BZI1 471 aaPredicted RBP20.26■□□□□ 0.83
PHF1-201ENST00000374512 NYXQ9GZU5 481 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 EPC1Q9H2F5 836 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 ABHD10Q9NUJ1 306 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 UBAP1LF5GYI3 381 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 OAS2P29728 719 aaKnown RBP20.26■□□□□ 0.83
PHF1-201ENST00000374512 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
PHF1-201ENST00000374512 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
PHF1-201ENST00000374512 KIF4BQ2VIQ3 1234 aa20.26■□□□□ 0.83
PHF1-201ENST00000374512 NSUN4Q96CB9 384 aaKnown RBP20.26■□□□□ 0.83
PHF1-201ENST00000374512 H7C1D1 291 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 CASP1P29466 404 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 NLRP5P59047 1200 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 TCP11X2Q5H9J9 407 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 SMYD4Q8IYR2 804 aaPredicted RBP20.25■□□□□ 0.83
PHF1-201ENST00000374512 SH3GLB2Q9NR46 395 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 USP17L21D6R901 530 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 WNT7AO00755 349 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 MYL1P05976 194 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 KIF5BP33176 963 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
PHF1-201ENST00000374512 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
PHF1-201ENST00000374512 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
PHF1-201ENST00000374512 NAPGQ99747 312 aaPredicted RBP20.25■□□□□ 0.83
PHF1-201ENST00000374512 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
PHF1-201ENST00000374512 LAMB1P07942 1786 aa20.24■□□□□ 0.83
PHF1-201ENST00000374512 COL24A1Q17RW2 1714 aa20.24■□□□□ 0.83
PHF1-201ENST00000374512 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
PHF1-201ENST00000374512 PSD3Q9NYI0 1048 aa20.24■□□□□ 0.83
PHF1-201ENST00000374512 hCG_1642624A0A1W2PR95 340 aa20.23■□□□□ 0.83
PHF1-201ENST00000374512 POLR3GO15318 223 aaPredicted RBP20.23■□□□□ 0.83
PHF1-201ENST00000374512 MECOMQ03112 1051 aa20.23■□□□□ 0.83
PHF1-201ENST00000374512 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
PHF1-201ENST00000374512 CRNKL1Q9BZJ0 848 aaKnown RBP20.23■□□□□ 0.83
PHF1-201ENST00000374512 ANKRD2Q9GZV1 360 aa20.23■□□□□ 0.83
PHF1-201ENST00000374512 GBP3Q9H0R5 595 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms