RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 OR8K1Q8NGG5 319 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 SMCR8Q8TEV9 937 aaPredicted RBP13.46□□□□□ -0.26
SNX21-205ENST00000372547 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.26
SNX21-205ENST00000372547 XDHP47989 1333 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 ITIH6Q6UXX5 1313 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 BAZ2BQ9UIF8 2168 aaKnown RBP13.45□□□□□ -0.26
SNX21-205ENST00000372547 AGPSO00116 658 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
SNX21-205ENST00000372547 ATF3P18847 181 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 MCM3P25205 808 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 KRT2P35908 639 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNX21-205ENST00000372547 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 KAT2BQ92831 832 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 SHISA4Q96DD7 197 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 CAPS2Q9BXY5 557 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 LACRTQ9GZZ8 138 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 HAUS4Q9H6D7 363 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 CCDC196A0A1B0GTZ2 297 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 XBP1P17861 261 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 BRMS1Q9HCU9 246 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
SNX21-205ENST00000372547 LIMA1Q9UHB6 759 aaKnown RBP13.45□□□□□ -0.26
SNX21-205ENST00000372547 SHTN1A0MZ66 631 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
SNX21-205ENST00000372547 TRIM21P19474 475 aaKnown RBP13.44□□□□□ -0.26
SNX21-205ENST00000372547 IBSPP21815 317 aaPredicted RBP13.44□□□□□ -0.26
SNX21-205ENST00000372547 CXCR5P32302 372 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 PRCPP42785 496 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 KLK7P49862 253 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 ECM29Q5VYK3 1845 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 MAP3K15Q6ZN16 1313 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 H0YHG0 523 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 PSMD14O00487 310 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 KRT86O43790 486 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 ZEB2O60315 1214 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 CCNI2Q6ZMN8 369 aaPredicted RBP13.44□□□□□ -0.26
SNX21-205ENST00000372547 SH3RF1Q7Z6J0 888 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 RUFY1Q96T51 708 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
SNX21-205ENST00000372547 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
SNX21-205ENST00000372547 SEMA3EO15041 775 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 DNA2P51530 1060 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 CKAP4Q07065 602 aaKnown RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 SPAG1Q07617 926 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 EHD2Q9NZN4 543 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 ZC3H4Q9UPT8 1303 aaKnown RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 GSG1L2A8MUP6 293 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 B4DLN1 442 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 TRIM14Q14142 442 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 MYCBPQ99417 103 aaPredicted RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 MST1RQ04912 1400 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 INPP5BP32019 993 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 PMS1P54277 932 aaKnown RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 WDR59Q6PJI9 974 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 MTRQ99707 1265 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 LRRC1Q9BTT6 524 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 YY1AP1Q9H869 796 aa13.43□□□□□ -0.26
SNX21-205ENST00000372547 DMGDHQ9UI17 866 aaKnown RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 MYO5AQ9Y4I1 1855 aaKnown RBP13.43□□□□□ -0.26
SNX21-205ENST00000372547 TCRBV5S4A2TA0A5A2 114 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 RPN1P04843 607 aaKnown RBP13.42□□□□□ -0.26
SNX21-205ENST00000372547 PDCLQ13371 301 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 MCTP2Q6DN12 878 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 SH2D3CQ8N5H7 860 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 ZNHIT6Q9NWK9 470 aaKnown RBP13.42□□□□□ -0.26
SNX21-205ENST00000372547 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 TNKSO95271 1327 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 SPEF2Q9C093 1822 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 ERCC3P19447 782 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 FECHP22830 423 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 KRT83P78385 493 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 FERMT2Q96AC1 680 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms