RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 USP17L11C9JVI0 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L18D6R9N7 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L22D6RA61 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L17D6RBQ6 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L19D6RCP7 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L20D6RJB6 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 TRPA1O75762 1119 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 BMP3P12645 472 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 NEK4P51957 841 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 USP17L24Q0WX57 530 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 CATSPERGQ6ZRH7 1159 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 RAB11FIP4Q86YS3 637 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 TMTC2Q8N394 836 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 RNF186Q9NXI6 227 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
TMEM53-203ENST00000372242 GOLGA8HP0CJ92 632 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-203ENST00000372242 APOBRQ0VD83 1088 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.65
TMEM53-203ENST00000372242 TOB2Q14106 344 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-203ENST00000372242 TAF1CQ15572 869 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-203ENST00000372242 CATIPQ7Z7H3 387 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 GPCPD1Q9NPB8 672 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 SLC45A1Q9Y2W3 748 aa19.1■□□□□ 0.65
TMEM53-203ENST00000372242 FLOT1O75955 427 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 SNHG28P0DPA3 235 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 RXRAP19793 462 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 MAP2K1Q02750 393 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-203ENST00000372242 TROAPQ12815 778 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 NUP133Q8WUM0 1156 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 DCAF4Q8WV16 495 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 P2RX7Q99572 595 aaKnown RBP19.09■□□□□ 0.65
TMEM53-203ENST00000372242 AGXT2Q9BYV1 514 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 SLC12A7Q9Y666 1083 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 OSBPP22059 807 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 ZNF543Q08ER8 600 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 CRHR2Q13324 411 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 JMYQ8N9B5 988 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 R3HDMLQ9H3Y0 253 aa19.09■□□□□ 0.65
TMEM53-203ENST00000372242 ZCCHC17Q9NP64 241 aaKnown RBP19.09■□□□□ 0.65
TMEM53-203ENST00000372242 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-203ENST00000372242 KLF18A0A0U1RQI7 1052 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 TBC1D8O95759 1140 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 ALDH1A1P00352 501 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 COG2Q14746 738 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 APOA5Q6Q788 366 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 FBXL16Q8N461 479 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.64
TMEM53-203ENST00000372242 PARK7Q99497 189 aaKnown RBP19.08■□□□□ 0.64
TMEM53-203ENST00000372242 WBP1LQ9NX94 342 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 PNMA3Q9UL41 463 aa19.08■□□□□ 0.64
TMEM53-203ENST00000372242 CA12O43570 354 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 PEX10O60683 326 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 SLC16A2P36021 539 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 IKQ13123 557 aaPredicted RBP19.07■□□□□ 0.64
TMEM53-203ENST00000372242 MICU3Q86XE3 530 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 STAG2Q8N3U4 1231 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 BEGAINQ9BUH8 593 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 CPVLQ9H3G5 476 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 PARP1P09874 1014 aaKnown RBP19.07■□□□□ 0.64
TMEM53-203ENST00000372242 AK2P54819 239 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 HERVK_113P62684 666 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 POTEEQ6S8J3 1075 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
TMEM53-203ENST00000372242 TSKSQ9UJT2 592 aa19.07■□□□□ 0.64
TMEM53-203ENST00000372242 RLFQ13129 1914 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 PARP14Q460N5 1801 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 SPDYE16A6NNV3 312 aaPredicted RBP19.06■□□□□ 0.64
TMEM53-203ENST00000372242 DDAH1O94760 285 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 STAT2P52630 851 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 SYNE3Q6ZMZ3 975 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 KIFC2Q96AC6 838 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 SLF1Q9BQI6 1058 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 UBA5Q9GZZ9 404 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 ZFYVE28Q9HCC9 887 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 MAD2L2Q9UI95 211 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
TMEM53-203ENST00000372242 ZBTB43O43298 467 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 GRM4Q14833 912 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 ASPRV1Q53RT3 343 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 GPATCH4Q5T3I0 446 aaKnown RBP19.05■□□□□ 0.64
TMEM53-203ENST00000372242 HOXC10Q9NYD6 342 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 CPA4Q9UI42 421 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
TMEM53-203ENST00000372242 GOLGA8BA8MQT2 603 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 TLR2O60603 784 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 DSG3P32926 999 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 RABEP1Q15276 862 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 PRPF38AQ8NAV1 312 aaKnown RBP19.04■□□□□ 0.64
TMEM53-203ENST00000372242 CHURC1Q8WUH1 139 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 ALDH8A1Q9H2A2 487 aaPredicted RBP19.04■□□□□ 0.64
TMEM53-203ENST00000372242 ADGRA2Q96PE1 1338 aa19.04■□□□□ 0.64
TMEM53-203ENST00000372242 PALM3A6NDB9 673 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms