RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 RRAGBQ5VZM2 374 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 CRCPO75575 148 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 APOBRQ0VD83 1088 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 TTC16Q8NEE8 873 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 PAWRQ96IZ0 340 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 SLC5A4Q9NY91 659 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 RABEP2Q9H5N1 569 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 PALLDQ8WX93 1383 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 BAG2O95816 211 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 NEK2P51955 445 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 PLCB1Q9NQ66 1216 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 RXRAP19793 462 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 GADL1Q6ZQY3 521 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 FCHSD1Q86WN1 690 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 NOP56O00567 594 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 SLC1A4P43007 532 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZBTB9Q96C00 473 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 ATG3Q9NT62 314 aa15.53■□□□□ 0.08
RAPGEF1-202ENST00000372190 B4E1Z4 1266 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 GPAA1O43292 621 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 FAM13AO94988 1023 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 OTUD7BQ6GQQ9 843 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 CPXCR1Q8N123 301 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 FBXO2Q9UK22 296 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 XDHP47989 1333 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 I3L4J1 428 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 RIOK3O14730 519 aaKnown RBP15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 MYCLP12524 364 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZAP70P43403 619 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCDC93Q567U6 631 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 SYNMO15061 1565 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 PTGS1P23219 599 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 SESN3P58005 492 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 CHRNDQ07001 517 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.082e-7■■■■■ 32.7
RAPGEF1-202ENST00000372190 HHATQ5VTY9 493 aa15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 DHX32Q7L7V1 743 aaKnown RBP15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF1-202ENST00000372190 GYG1P46976 350 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 CENPKQ9BS16 269 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 ARHGAP31Q2M1Z3 1444 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 ZBTB7BO15156 539 aaPredicted RBP15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 NOP14P78316 857 aaKnown RBP15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 KARSQ15046 597 aaKnown RBP15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 MCTP2Q6DN12 878 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 FAM212AQ96EL1 285 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 GUCA1BQ9UMX6 200 aa15.52■□□□□ 0.07
RAPGEF1-202ENST00000372190 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 WDR46O15213 610 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 WBP4O75554 376 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 IFT20Q8IY31 132 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 PDZD8Q8NEN9 1154 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 FBXO41Q8TF61 875 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 ZNF532Q9HCE3 1301 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 EEF1DP29692 281 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANLNQ9NQW6 1124 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 HGSO14964 777 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 PRDM1O75626 825 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 DIABLOQ9NR28 239 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 RRP15Q9Y3B9 282 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 TRIM75PA6NK02 468 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 MCM7P33993 719 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 GEN1Q17RS7 908 aa15.51■□□□□ 0.07
RAPGEF1-202ENST00000372190 ZNF804BA4D1E1 1349 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ACTN4O43707 911 aaKnown RBP15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 AFMP43652 599 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 PIGBQ92521 554 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 SLC24A3Q9HC58 644 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 LZTFL1Q9NQ48 299 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 CDC42BPAQ5VT25 1732 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ELF2Q15723 593 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 TRIM6Q9C030 488 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANKRD20A4Q4UJ75 823 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANKRD20A8PQ5CZ79 823 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANKRD20A2Q5SQ80 823 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANKRD20A1Q5TYW2 823 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 SPATA31E1Q6ZUB1 1445 aa15.5■□□□□ 0.07
RAPGEF1-202ENST00000372190 KRT10P13645 584 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 MTMR3Q13615 1198 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 HSP90AA4PQ58FG1 418 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 RGS22Q8NE09 1264 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 ARHGAP42A6NI28 874 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 CLTAP09496 248 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms