RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
UBE2A-202ENST00000371558 DOCK1Q14185 1865 aa16.64■□□□□ 0.25
UBE2A-202ENST00000371558 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
UBE2A-202ENST00000371558 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 F5H6K3 240 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 INPP5BP32019 993 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 KLRC3Q07444 240 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 KIF28PB7ZC32 967 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 SLC1A4P43007 532 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 TTBK2Q6IQ55 1244 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
UBE2A-202ENST00000371558 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 GLIS2Q9BZE0 524 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
UBE2A-202ENST00000371558 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 IQCA1LA6NCM1 817 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 POTECB2RU33 542 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 NDUFB10O96000 172 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 SCG2P13521 617 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 SLC16A2P36021 539 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
UBE2A-202ENST00000371558 GNL2Q13823 731 aaKnown RBP16.62■□□□□ 0.25
UBE2A-202ENST00000371558 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
UBE2A-202ENST00000371558 KRT26Q7Z3Y9 468 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
UBE2A-202ENST00000371558 SPZ1Q9BXG8 430 aa16.62■□□□□ 0.25
UBE2A-202ENST00000371558 FIBPO43427 364 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 CTNND1O60716 968 aaKnown RBP16.61■□□□□ 0.25
UBE2A-202ENST00000371558 XBP1P17861 261 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
UBE2A-202ENST00000371558 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
UBE2A-202ENST00000371558 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
UBE2A-202ENST00000371558 MMP1P03956 469 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
UBE2A-202ENST00000371558 PIGSQ96S52 555 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 TMX2Q9Y320 296 aa16.61■□□□□ 0.25
UBE2A-202ENST00000371558 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
UBE2A-202ENST00000371558 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
UBE2A-202ENST00000371558 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
UBE2A-202ENST00000371558 DIS3L2Q8IYB7 885 aaKnown RBP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 FEZ1Q99689 392 aa16.6■□□□□ 0.25
UBE2A-202ENST00000371558 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
UBE2A-202ENST00000371558 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
UBE2A-202ENST00000371558 KRT85P78386 507 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 GMCL1Q96IK5 515 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 BTBD18B2RXH4 712 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 BMP3P12645 472 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
UBE2A-202ENST00000371558 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
UBE2A-202ENST00000371558 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 RGS22Q8NE09 1264 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
UBE2A-202ENST00000371558 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 SH2D4AQ9H788 454 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
UBE2A-202ENST00000371558 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 NLRP5P59047 1200 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 NR5A1Q13285 461 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE2A-202ENST00000371558 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 OTOFQ9HC10 1997 aa16.58■□□□□ 0.24
UBE2A-202ENST00000371558 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 TMEM232C9JQI7 657 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 USP2O75604 605 aaPredicted RBP16.57■□□□□ 0.24
UBE2A-202ENST00000371558 DGKZQ13574 1117 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 BRAPQ7Z569 592 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
UBE2A-202ENST00000371558 CDCA5Q96FF9 252 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 PICK1Q9NRD5 415 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
UBE2A-202ENST00000371558 U2AF2P26368 475 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE2A-202ENST00000371558 KRT2P35908 639 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms