RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.39
EXOSC1-203ENST00000370886 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
EXOSC1-203ENST00000370886 MTMR10Q9NXD2 777 aa12.62□□□□□ -0.39
EXOSC1-203ENST00000370886 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
EXOSC1-203ENST00000370886 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
EXOSC1-203ENST00000370886 NAV1Q8NEY1 1877 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 E7EWF7 191 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 BACE1P56817 501 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 NECTIN1Q15223 517 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 KRT23Q9C075 422 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
EXOSC1-203ENST00000370886 DDX60LQ5H9U9 1706 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 DOCK1Q14185 1865 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 HMGCRP04035 888 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 CHST3Q7LGC8 479 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 PNMA3Q9UL41 463 aa12.6□□□□□ -0.39
EXOSC1-203ENST00000370886 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 SEC24BO95487 1268 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 TTLL1O95922 423 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 FGRP09769 529 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 MCCP23508 829 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 TREML2Q5T2D2 321 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 C11orf49Q9H6J7 331 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
EXOSC1-203ENST00000370886 MYH1P12882 1939 aa12.58□□□□□ -0.39
EXOSC1-203ENST00000370886 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 SYN1P17600 705 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 USP14P54578 494 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 CYB5R4Q7L1T6 521 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 ZSCAN10Q96SZ4 725 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 USP26Q9BXU7 913 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 KIAA1683Q9H0B3 1180 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 RPTORQ8N122 1335 aa12.58□□□□□ -0.4
EXOSC1-203ENST00000370886 CDK5RAP2Q96SN8 1893 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 IFIT3O14879 490 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 EIF5BO60841 1220 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 HSPA4P34932 840 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 JAKMIP1Q96N16 626 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 TANGO6Q9C0B7 1094 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 SIPA1L1O43166 1804 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 PHIPQ8WWQ0 1821 aa12.57□□□□□ -0.4
EXOSC1-203ENST00000370886 TTC28Q96AY4 2481 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 ERICH2A1L162 156 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 F5H6K3 240 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 PRC1O43663 620 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 CPA1P15085 419 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 VCAM1P19320 739 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 GCLCP48506 637 aaPredicted RBP12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 KLRC3Q07444 240 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 KRT32Q14532 448 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 KIAA1755Q5JYT7 1200 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 SLFN13Q68D06 897 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 TMEM47Q9BQJ4 181 aa12.56□□□□□ -0.4
EXOSC1-203ENST00000370886 LRRC2Q9BYS8 371 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms