RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 RAB3IL1Q8TBN0 382 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 UBXN6Q9BZV1 441 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 IL13P35225 146 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 TSNAXIP1Q2TAA8 658 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 NBPF9Q3BBW0 867 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 DCAF17Q5H9S7 520 aaPredicted RBP8.55□□□□□ -1.04
UFL1-201ENST00000369278 CFAP157Q5JU67 520 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 NLRP14Q86W24 1093 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 NELFCDQ8IXH7 590 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 FMR1NBQ8N0W7 255 aaPredicted RBP8.55□□□□□ -1.04
UFL1-201ENST00000369278 CCDC197Q8NCU1 140 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 MS4A14Q96JA4 679 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 CCT8L2Q96SF2 557 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 SHANK2Q9UPX8 1470 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
UFL1-201ENST00000369278 PDE4BQ07343 736 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 PDE4DQ08499 809 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 KIF22Q14807 665 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 MCUR1Q96AQ8 359 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 STX8Q9UNK0 236 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 PLAAQ9Y263 795 aa8.55□□□□□ -1.04
UFL1-201ENST00000369278 TRIM49BA6NDI0 452 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 NDUFA10O95299 355 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 POLD1P28340 1107 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 FMR1Q06787 632 aaKnown RBP eCLIP8.54□□□□□ -1.046e-9■□□□□ 10
UFL1-201ENST00000369278 MORC3Q14149 939 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 NECTIN1Q15223 517 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 ISLR2Q6UXK2 745 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 IQUBQ8NA54 791 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 DDX27Q96GQ7 796 aaKnown RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 IFT74Q96LB3 600 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 C19orf44Q9H6X5 657 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 TRAF5O00463 557 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 PLS1Q14651 629 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 KCNB1Q14721 858 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 THEMIS2Q5TEJ8 643 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 VPS52Q8N1B4 723 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 HIPK4Q8NE63 616 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 GSDMBQ8TAX9 411 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 NOX5Q96PH1 765 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 EYA1Q99502 592 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 CSRNP2Q9H175 543 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 TCP11L1Q9NUJ3 509 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 INTS9Q9NV88 658 aaKnown RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 FAM184BQ9ULE4 1060 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 ZNF711Q9Y462 761 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 ATP10DQ9P241 1426 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 MSH2P43246 934 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
UFL1-201ENST00000369278 MAGOHP61326 146 aaKnown RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 ZC3H18Q86VM9 953 aaKnown RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 PARD3BQ8TEW8 1205 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 MAGOHBQ96A72 148 aaKnown RBP8.54□□□□□ -1.04
UFL1-201ENST00000369278 CARD10Q9BWT7 1032 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 KANSL2Q9H9L4 492 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 PICK1Q9NRD5 415 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 L1RE1Q9UN81 338 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 HYOU1Q9Y4L1 999 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 KIAA0556O60303 1618 aa8.54□□□□□ -1.04
UFL1-201ENST00000369278 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 OPLAHO14841 1288 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 PPP1R12AO14974 1030 aaPredicted RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 EIF3HO15372 352 aaKnown RBP eCLIP8.53□□□□□ -1.04
UFL1-201ENST00000369278 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 COPB1P53618 953 aaKnown RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 ARMC9Q7Z3E5 817 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 SSH3Q8TE77 659 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 OSBPL3Q9H4L5 887 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 HAUS4Q9H6D7 363 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 HPCAL4Q9UM19 191 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 PTPN22Q9Y2R2 807 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 WDR91A4D1P6 747 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 YY1P25490 414 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 PLTPP55058 493 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 VPS36Q86VN1 386 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 DDX42Q86XP3 938 aaKnown RBP eCLIP8.53□□□□□ -1.04
UFL1-201ENST00000369278 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 ZNF473Q8WTR7 871 aaKnown RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 STAMBPL1Q96FJ0 436 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
UFL1-201ENST00000369278 SH3GL3Q99963 347 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 RTEL1Q9NZ71 1219 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 GDAQ9Y2T3 454 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 DUSP10Q9Y6W6 482 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 TUBGCP6Q96RT7 1819 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 PTPRTO14522 1441 aa8.53□□□□□ -1.04
UFL1-201ENST00000369278 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms