RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CPVLQ9H3G5 476 aa27.6■■■□□ 2.01
SNX3-203ENST00000368979 VPS54Q9P1Q0 977 aa27.6■■■□□ 2.01
SNX3-203ENST00000368979 PHF20Q9BVI0 1012 aa27.59■■■□□ 2.01
SNX3-203ENST00000368979 ZNF341Q9BYN7 854 aa27.59■■■□□ 2.01
SNX3-203ENST00000368979 KCNJ14Q9UNX9 436 aa27.59■■■□□ 2.01
SNX3-203ENST00000368979 TMX2Q9Y320 296 aa27.59■■■□□ 2.01
SNX3-203ENST00000368979 DOCK1Q14185 1865 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 F5H6K3 240 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 CTNND1O60716 968 aaKnown RBP27.58■■■□□ 2.01
SNX3-203ENST00000368979 YY1P25490 414 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 U2AF2P26368 475 aaKnown RBP eCLIP27.58■■■□□ 2.01
SNX3-203ENST00000368979 EPHX2P34913 555 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 KLRC3Q07444 240 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 PRAMEF18Q5VWM3 479 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 GMCL1Q96IK5 515 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 ANP32EQ9BTT0 268 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 GDPD2Q9HCC8 539 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.58■■■□□ 2.01
SNX3-203ENST00000368979 ZNF112Q9UJU3 913 aa27.58■■■□□ 2.01
SNX3-203ENST00000368979 PRPF40AO75400 957 aaKnown RBP27.57■■■□□ 2
SNX3-203ENST00000368979 VEGFAP15692 232 aaPredicted RBP27.57■■■□□ 2
SNX3-203ENST00000368979 NCLP19338 710 aaKnown RBP27.57■■■□□ 2
SNX3-203ENST00000368979 CCDC96Q2M329 555 aa27.57■■■□□ 2
SNX3-203ENST00000368979 PIBF1Q8WXW3 757 aa27.57■■■□□ 2
SNX3-203ENST00000368979 DCPSQ96C86 337 aaKnown RBP27.57■■■□□ 2
SNX3-203ENST00000368979 UBA5Q9GZZ9 404 aa27.57■■■□□ 2
SNX3-203ENST00000368979 GPCPD1Q9NPB8 672 aa27.57■■■□□ 2
SNX3-203ENST00000368979 NDUFB10O96000 172 aa27.57■■■□□ 2
SNX3-203ENST00000368979 ECE1P42892 770 aa27.57■■■□□ 2
SNX3-203ENST00000368979 ACER1Q8TDN7 264 aa27.57■■■□□ 2
SNX3-203ENST00000368979 SH3GLB2Q9NR46 395 aa27.57■■■□□ 2
SNX3-203ENST00000368979 DCAF8L1A6NGE4 600 aa27.56■■■□□ 2
SNX3-203ENST00000368979 FIBPO43427 364 aa27.56■■■□□ 2
SNX3-203ENST00000368979 SLC1A4P43007 532 aa27.56■■■□□ 2
SNX3-203ENST00000368979 SAFBQ15424 915 aaKnown RBP eCLIP27.56■■■□□ 2
SNX3-203ENST00000368979 ATL3Q6DD88 541 aa27.56■■■□□ 2
SNX3-203ENST00000368979 KCTD1Q719H9 257 aa27.56■■■□□ 2
SNX3-203ENST00000368979 USP48Q86UV5 1035 aa27.56■■■□□ 2
SNX3-203ENST00000368979 DIS3L2Q8IYB7 885 aaKnown RBP27.56■■■□□ 2
SNX3-203ENST00000368979 RRP36Q96EU6 259 aaKnown RBP27.56■■■□□ 2
SNX3-203ENST00000368979 SUPT20HL1Q3ZLR7 823 aa27.55■■■□□ 2
SNX3-203ENST00000368979 TTBK2Q6IQ55 1244 aa27.55■■■□□ 2
SNX3-203ENST00000368979 ZC3H15Q8WU90 426 aaKnown RBP27.55■■■□□ 2
SNX3-203ENST00000368979 FOXP1Q9H334 677 aaPredicted RBP27.55■■■□□ 2
SNX3-203ENST00000368979 POLR2AP24928 1970 aaKnown RBP27.55■■■□□ 2
SNX3-203ENST00000368979 IQCA1LA6NCM1 817 aa27.54■■■□□ 2
SNX3-203ENST00000368979 INPP5BP32019 993 aa27.54■■■□□ 2
SNX3-203ENST00000368979 NPY5RQ15761 445 aa27.54■■■□□ 2
SNX3-203ENST00000368979 CSPP1Q1MSJ5 1256 aa27.54■■■□□ 2
SNX3-203ENST00000368979 MYSM1Q5VVJ2 828 aa27.54■■■□□ 2
SNX3-203ENST00000368979 WWC2Q6AWC2 1192 aa27.54■■■□□ 2
SNX3-203ENST00000368979 SULF1Q8IWU6 871 aa27.54■■■□□ 2
SNX3-203ENST00000368979 FAM177A1Q8N128 213 aaPredicted RBP27.54■■■□□ 2
SNX3-203ENST00000368979 ZNF396Q96N95 335 aaPredicted RBP27.54■■■□□ 2
SNX3-203ENST00000368979 SH2D4AQ9H788 454 aa27.54■■■□□ 2
SNX3-203ENST00000368979 POTECB2RU33 542 aa27.53■■■□□ 2
SNX3-203ENST00000368979 BTBD18B2RXH4 712 aa27.53■■■□□ 2
SNX3-203ENST00000368979 RAD21O60216 631 aa27.53■■■□□ 2
SNX3-203ENST00000368979 TRAK2O60296 914 aa27.53■■■□□ 2
SNX3-203ENST00000368979 GPKOWQ92917 476 aaPredicted RBP eCLIP27.53■■■□□ 2
SNX3-203ENST00000368979 PIGSQ96S52 555 aa27.53■■■□□ 2
SNX3-203ENST00000368979 SCAND2PQ9GZW5 306 aaPredicted RBP27.53■■■□□ 2
SNX3-203ENST00000368979 TAF1DQ9H5J8 278 aaPredicted RBP27.53■■■□□ 2
SNX3-203ENST00000368979 GOPCQ9HD26 462 aa27.53■■■□□ 2
SNX3-203ENST00000368979 CFAP45Q9UL16 551 aa27.53■■■□□ 2
SNX3-203ENST00000368979 BAZ2BQ9UIF8 2168 aaKnown RBP27.53■■■□□ 2
SNX3-203ENST00000368979 PAPPA2Q9BXP8 1791 aa27.52■■■□□ 2
SNX3-203ENST00000368979 ADM5C9JUS6 153 aa27.52■■■□□ 2
SNX3-203ENST00000368979 GNL2Q13823 731 aaKnown RBP27.52■■■□□ 2
SNX3-203ENST00000368979 ADGRF4Q8IZF3 695 aa27.52■■■□□ 2
SNX3-203ENST00000368979 MTMR8Q96EF0 704 aa27.52■■■□□ 2
SNX3-203ENST00000368979 VCPKMTQ9H867 229 aa27.52■■■□□ 2
SNX3-203ENST00000368979 JMJD4Q9H9V9 463 aa27.52■■■□□ 2
SNX3-203ENST00000368979 BARHL2Q9NY43 387 aa27.52■■■□□ 2
SNX3-203ENST00000368979 TFIP11Q9UBB9 837 aaKnown RBP27.52■■■□□ 2
SNX3-203ENST00000368979 SEC63Q9UGP8 760 aaKnown RBP27.52■■■□□ 2
SNX3-203ENST00000368979 ELP1O95163 1332 aa27.52■■■□□ 2
SNX3-203ENST00000368979 STXBP3O00186 592 aa27.51■■■□□ 2
SNX3-203ENST00000368979 KRT2P35908 639 aa27.51■■■□□ 2
SNX3-203ENST00000368979 SKOR2Q2VWA4 1001 aaPredicted RBP27.51■■■□□ 2
SNX3-203ENST00000368979 CCDC84Q86UT8 332 aaPredicted RBP27.51■■■□□ 2
SNX3-203ENST00000368979 HOMER1Q86YM7 354 aa27.51■■■□□ 2
SNX3-203ENST00000368979 NOSTRINQ8IVI9 506 aa27.51■■■□□ 2
SNX3-203ENST00000368979 SCYL3Q8IZE3 742 aa27.51■■■□□ 2
SNX3-203ENST00000368979 KLRG1Q96E93 195 aa27.51■■■□□ 2
SNX3-203ENST00000368979 USP28Q96RU2 1077 aa27.51■■■□□ 2
SNX3-203ENST00000368979 WRNIP1Q96S55 665 aa27.51■■■□□ 2
SNX3-203ENST00000368979 GLIS2Q9BZE0 524 aaPredicted RBP27.51■■■□□ 2
SNX3-203ENST00000368979 VAT1LQ9HCJ6 419 aa27.51■■■□□ 2
SNX3-203ENST00000368979 hCG_1984214I3L0E3 225 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 BMP3P12645 472 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 SLC16A2P36021 539 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 KIAA1755Q5JYT7 1200 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 TYW1BQ6NUM6 668 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 ZNF713Q8N859 430 aaPredicted RBP27.51■■□□□ 1.99
SNX3-203ENST00000368979 OXER1Q8TDS5 423 aa27.51■■□□□ 1.99
SNX3-203ENST00000368979 LEO1Q8WVC0 666 aaPredicted RBP27.51■■□□□ 1.99
SNX3-203ENST00000368979 NUP88Q99567 741 aaPredicted RBP27.51■■□□□ 1.99
SNX3-203ENST00000368979 NR5A1Q13285 461 aa27.5■■□□□ 1.99
SNX3-203ENST00000368979 KRT26Q7Z3Y9 468 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms