RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
SNX27-201ENST00000368838 IFNL3Q8IZI9 196 aa10.34□□□□□ -0.75
SNX27-201ENST00000368838 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
SNX27-201ENST00000368838 JAKMIP1Q96N16 626 aaKnown RBP10.34□□□□□ -0.75
SNX27-201ENST00000368838 RNF208Q9H0X6 261 aa10.34□□□□□ -0.75
SNX27-201ENST00000368838 OSBPL5Q9H0X9 879 aaPredicted RBP10.34□□□□□ -0.75
SNX27-201ENST00000368838 CNNM2Q9H8M5 875 aa10.34□□□□□ -0.75
SNX27-201ENST00000368838 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
SNX27-201ENST00000368838 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
SNX27-201ENST00000368838 DDX60LQ5H9U9 1706 aaKnown RBP10.34□□□□□ -0.75
SNX27-201ENST00000368838 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 E7EWF7 191 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 ADCY3O60266 1144 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 BAG3O95817 575 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 CASTP20810 708 aaKnown RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 DYNLL1P63167 89 aaKnown RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 JAG1P78504 1218 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 DPF3Q92784 378 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 NOL10Q9BSC4 688 aaKnown RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 RNF41Q9H4P4 317 aaPredicted RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 MBD4O95243 580 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 GDF11O95390 407 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 INHAP05111 366 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 AK2P54819 239 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 NUCB2P80303 420 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 MB21D2Q8IYB1 491 aaPredicted RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 ZNF280CQ8ND82 737 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 NCOA7Q8NI08 942 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 ZNF274Q96GC6 653 aaPredicted RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 TMEM87BQ96K49 555 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 AGTPBP1Q9UPW5 1226 aa10.33□□□□□ -0.76
SNX27-201ENST00000368838 ZNFX1Q9P2E3 1918 aaKnown RBP10.33□□□□□ -0.76
SNX27-201ENST00000368838 TBC1D12O60347 775 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 MCM5P33992 734 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 CAP2P40123 477 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 LIFRP42702 1097 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 UBXN2AP68543 259 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 MTMR2Q13614 643 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 STOX1Q6ZVD7 989 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 LCORLQ8N3X6 602 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 CRNKL1Q9BZJ0 848 aaKnown RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 KRT23Q9C075 422 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 NAPBQ9H115 298 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 DNAJC18Q9H819 358 aa10.32□□□□□ -0.76
SNX27-201ENST00000368838 EPB41L4AQ9HCS5 686 aaPredicted RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 ARPP21Q9UBL0 812 aaPredicted RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.32□□□□□ -0.76
SNX27-201ENST00000368838 COL2A1P02458 1487 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 LAMA4Q16363 1823 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 ORC4O43929 436 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 GJB1P08034 283 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 FLT1P17948 1338 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 GJA8P48165 433 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 FXR1P51114 621 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNX27-201ENST00000368838 TRIM32Q13049 653 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 TRDNQ13061 729 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 TOB2Q14106 344 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 PPP2R5BQ15173 497 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SGMS1Q86VZ5 419 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 TMTC2Q8N394 836 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 CRACR2BQ8N4Y2 399 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 MIGA1Q8NAN2 632 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 U2AF1L4Q8WU68 220 aaKnown RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 ROBO3Q96MS0 1386 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 DEFB118Q96PH6 123 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 ASCC2Q9H1I8 757 aaPredicted RBP10.31□□□□□ -0.76
SNX27-201ENST00000368838 ARMT1Q9H993 441 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SLC45A1Q9Y2W3 748 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SLC4A4Q9Y6R1 1079 aa10.31□□□□□ -0.76
SNX27-201ENST00000368838 SZT2Q5T011 3432 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 NID2Q14112 1375 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 FARP2O94887 1054 aaPredicted RBP10.3□□□□□ -0.76
SNX27-201ENST00000368838 TFRCP02786 760 aaKnown RBP10.3□□□□□ -0.76
SNX27-201ENST00000368838 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
SNX27-201ENST00000368838 COA7Q96BR5 231 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 TRIM34Q9BYJ4 488 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 NBPF3Q9H094 633 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 DCP1AQ9NPI6 582 aaPredicted RBP10.3□□□□□ -0.76
SNX27-201ENST00000368838 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 TAF6LQ9Y6J9 622 aa10.3□□□□□ -0.76
SNX27-201ENST00000368838 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 PFKFB2O60825 505 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 SGPL1O95470 568 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
SNX27-201ENST00000368838 PPARAQ07869 468 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms