RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 ZSWIM5Q9P217 1185 aa15.46■□□□□ 0.07
PMF1-201ENST00000368273 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.46■□□□□ 0.07
PMF1-201ENST00000368273 GREB1LQ9C091 1923 aaPredicted RBP15.45■□□□□ 0.06
PMF1-201ENST00000368273 PFKFB2O60825 505 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 NT5C2P49902 561 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 IRX3P78415 501 aaPredicted RBP15.45■□□□□ 0.06
PMF1-201ENST00000368273 LACTBP83111 547 aaPredicted RBP15.45■□□□□ 0.06
PMF1-201ENST00000368273 CAP1Q01518 475 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 KIF22Q14807 665 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 ARHGEF6Q15052 776 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 RRP12Q5JTH9 1297 aaKnown RBP15.45■□□□□ 0.06
PMF1-201ENST00000368273 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 ESR2Q92731 530 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 GTF3C6Q969F1 213 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 SH2D4AQ9H788 454 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 EFCC1Q9HA90 598 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
PMF1-201ENST00000368273 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 TMX2Q9Y320 296 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
PMF1-201ENST00000368273 EEF2P13639 858 aaKnown RBP15.44■□□□□ 0.06
PMF1-201ENST00000368273 VCAM1P19320 739 aa15.44■□□□□ 0.06
PMF1-201ENST00000368273 GCLCP48506 637 aaPredicted RBP15.44■□□□□ 0.06
PMF1-201ENST00000368273 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
PMF1-201ENST00000368273 ABHD8Q96I13 439 aa15.44■□□□□ 0.06
PMF1-201ENST00000368273 P2RX7Q99572 595 aaKnown RBP15.44■□□□□ 0.06
PMF1-201ENST00000368273 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L15C9J2P7 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L13C9JLJ4 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L11C9JVI0 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L18D6R9N7 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L22D6RA61 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L17D6RBQ6 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L19D6RCP7 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L20D6RJB6 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
PMF1-201ENST00000368273 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
PMF1-201ENST00000368273 LIFRP42702 1097 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 USP17L24Q0WX57 530 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 STK3Q13188 491 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 SART3Q15020 963 aaKnown RBP15.43■□□□□ 0.06
PMF1-201ENST00000368273 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 FBXO46Q6PJ61 603 aaPredicted RBP15.43■□□□□ 0.06
PMF1-201ENST00000368273 CATSPERGQ6ZRH7 1159 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 SMC3Q9UQE7 1217 aa15.43■□□□□ 0.06
PMF1-201ENST00000368273 PLIN4Q96Q06 1357 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 KLF18A0A0U1RQI7 1052 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 GNRH1P01148 92 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 TSPY3P0CV98 308 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 TSPY8P0CW00 308 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 CTGFP29279 349 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 PSMC4P43686 418 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 HERVK_113P62684 666 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 NUCB2P80303 420 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 TFAP4Q01664 338 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 SGMS1Q86VZ5 419 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 ANKRD13CQ8N6S4 541 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 NEDD1Q8NHV4 660 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 LPAR1Q92633 364 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 CHMP4CQ96CF2 233 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 NYAP2Q9P242 653 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 BRPF3Q9ULD4 1205 aa15.42■□□□□ 0.06
PMF1-201ENST00000368273 ZSWIM8A7E2V4 1837 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 RANBP6O60518 1105 aaKnown RBP15.41■□□□□ 0.06
PMF1-201ENST00000368273 SCRN1Q12765 414 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 FAM47AQ5JRC9 791 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 KIAA1755Q5JYT7 1200 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
PMF1-201ENST00000368273 TRIM47Q96LD4 638 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 LLPHQ9BRT6 129 aaKnown RBP15.41■□□□□ 0.06
PMF1-201ENST00000368273 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 RPAP3Q9H6T3 665 aaPredicted RBP15.41■□□□□ 0.06
PMF1-201ENST00000368273 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 PTPN22Q9Y2R2 807 aa15.41■□□□□ 0.06
PMF1-201ENST00000368273 ERICH2A1L162 156 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
PMF1-201ENST00000368273 WTAPQ15007 396 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 SEC23AQ15436 765 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 TMTC2Q8N394 836 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 CEP95Q96GE4 821 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 SENP2Q9HC62 589 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 MTMR4Q9NYA4 1195 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
PMF1-201ENST00000368273 HPS5Q9UPZ3 1129 aa15.4■□□□□ 0.06
PMF1-201ENST00000368273 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
PMF1-201ENST00000368273 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
PMF1-201ENST00000368273 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
PMF1-201ENST00000368273 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
PMF1-201ENST00000368273 TTLL1O95922 423 aa15.39■□□□□ 0.05
PMF1-201ENST00000368273 GJB2P29033 226 aa15.39■□□□□ 0.05
PMF1-201ENST00000368273 PRMT2P55345 433 aa15.39■□□□□ 0.05
PMF1-201ENST00000368273 FCGRTP55899 365 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms