RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 YARSP54577 528 aaKnown RBP14.3□□□□□ -0.12
PTPRK-207ENST00000368226 UNC5CLQ8IV45 518 aa14.3□□□□□ -0.12
PTPRK-207ENST00000368226 NOX5Q96PH1 765 aa14.3□□□□□ -0.12
PTPRK-207ENST00000368226 CSRNP1Q96S65 589 aa14.3□□□□□ -0.12
PTPRK-207ENST00000368226 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
PTPRK-207ENST00000368226 INSRP06213 1382 aa14.3□□□□□ -0.12
PTPRK-207ENST00000368226 PRKAB2O43741 272 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 NR1I2O75469 434 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ANKFY1Q9P2R3 1169 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 BTBD18B2RXH4 712 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 RXRBP28702 533 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 PKP1Q13835 747 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 GPATCH11Q8N954 259 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 USP28Q96RU2 1077 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ASIC3Q9UHC3 531 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 DLATP10515 647 aaKnown RBP14.29□□□□□ -0.12
PTPRK-207ENST00000368226 SFMBT2Q5VUG0 894 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 CASC4Q6P4E1 433 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 UBL4BQ8N7F7 174 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 CARD6Q9BX69 1037 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 PDE8BO95263 885 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 TAB3Q8N5C8 712 aaPredicted RBP14.29□□□□□ -0.12
PTPRK-207ENST00000368226 SLC39A2Q9NP94 309 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
PTPRK-207ENST00000368226 NPC1L1Q9UHC9 1359 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
PTPRK-207ENST00000368226 ADCY9O60503 1353 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 MAGEA1P43355 309 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 TRIM14Q14142 442 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 GNPTABQ3T906 1256 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 KSR1Q8IVT5 923 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 U2AF1L4Q8WU68 220 aaKnown RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 TRIM7Q9C029 511 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 LIG4P49917 911 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 PLA2G4DQ86XP0 818 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 UTP11Q9Y3A2 253 aaKnown RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 VIMP08670 466 aaKnown RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 CLCN1P35523 988 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 SNAP25P60880 206 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 GDAP1L1Q96MZ0 367 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 PPP1R16BQ96T49 567 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 ROBO2Q9HCK4 1378 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 SCG2P13521 617 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 ADCK5Q3MIX3 580 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 BLMP54132 1417 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 XDHP47989 1333 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 MNAT1P51948 309 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 PTPN21Q16825 1174 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
PTPRK-207ENST00000368226 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
PTPRK-207ENST00000368226 SYNJ2BP-COX16A0A087WUM0 186 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.12
PTPRK-207ENST00000368226 BCRP11274 1271 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 TTC14Q96N46 770 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 COX16Q9P0S2 106 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 KRT27Q7Z3Y8 459 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 NLGN1Q8N2Q7 840 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 CCDC127Q96BQ5 260 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.12
PTPRK-207ENST00000368226 SCRN1Q12765 414 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 MRPL11Q9Y3B7 192 aaKnown RBP14.27□□□□□ -0.13
PTPRK-207ENST00000368226 LRRIQ4A6NIV6 560 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 DCAF15Q66K64 600 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 SEPT14Q6ZU15 432 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 NEK8Q86SG6 692 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 KIAA1524Q8TCG1 905 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 XPO4Q9C0E2 1151 aaKnown RBP14.27□□□□□ -0.13
PTPRK-207ENST00000368226 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 PCDHA1Q9Y5I3 950 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 MED23Q9ULK4 1368 aa14.27□□□□□ -0.13
PTPRK-207ENST00000368226 EFCAB6Q5THR3 1501 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 RFX1P22670 979 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 HSPA1LP34931 641 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms