RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 E7EWF7 191 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
USF1-201ENST00000368019 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
USF1-201ENST00000368019 ME1P48163 572 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 CACNB3P54284 484 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 TERF2Q15554 542 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
USF1-201ENST00000368019 CCL15Q16663 113 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 DBNDD2Q9BQY9 259 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 SIL1Q9H173 461 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 CSADQ9Y600 493 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 SNCAIPQ9Y6H5 919 aa13.21□□□□□ -0.29
USF1-201ENST00000368019 ZSWIM8A7E2V4 1837 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 NEDD4P46934 1319 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
USF1-201ENST00000368019 CMA1P23946 247 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 PUM3Q15397 648 aaKnown RBP13.2□□□□□ -0.3
USF1-201ENST00000368019 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
USF1-201ENST00000368019 E4F1Q66K89 784 aaPredicted RBP13.2□□□□□ -0.3
USF1-201ENST00000368019 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
USF1-201ENST00000368019 ERO1BQ86YB8 467 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
USF1-201ENST00000368019 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
USF1-201ENST00000368019 MAST3O60307 1309 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 EYA2O00167 538 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 HSPD1P10809 573 aaKnown RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 STK38Q15208 465 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 ATG9AQ7Z3C6 839 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 PPP1R13BQ96KQ4 1090 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 SDF4Q9BRK5 362 aa13.19□□□□□ -0.3
USF1-201ENST00000368019 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
USF1-201ENST00000368019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.38e-7■■■□□ 17.7
USF1-201ENST00000368019 CEP290O15078 2479 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 SPTLC2O15270 562 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 PPP6R2O75170 966 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
USF1-201ENST00000368019 ETF1P62495 437 aaKnown RBP13.18□□□□□ -0.3
USF1-201ENST00000368019 NCAPHQ15003 741 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 MYSM1Q5VVJ2 828 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 LPIN2Q92539 896 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
USF1-201ENST00000368019 EDC3Q96F86 508 aaKnown RBP13.18□□□□□ -0.3
USF1-201ENST00000368019 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 WRNIP1Q96S55 665 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
USF1-201ENST00000368019 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
USF1-201ENST00000368019 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 BTBD19C9JJ37 291 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 IRF6O14896 467 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 TLR2O60603 784 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 CETPP11597 493 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
USF1-201ENST00000368019 PPIL2Q13356 520 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
USF1-201ENST00000368019 ELF2Q15723 593 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 ARMCX5Q6P1M9 558 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
USF1-201ENST00000368019 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
USF1-201ENST00000368019 TMX1Q9H3N1 280 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
USF1-201ENST00000368019 ZBTB22O15209 634 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 ZNF202O95125 648 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 SLC5A1P13866 664 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
USF1-201ENST00000368019 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
USF1-201ENST00000368019 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 DCAF15Q66K64 600 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 ZNF341Q9BYN7 854 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 CALCOCO1Q9P1Z2 691 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
USF1-201ENST00000368019 DAGLAQ9Y4D2 1042 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms