RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 IFNB1P01574 187 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 PLIN2Q99541 437 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 CAPN9O14815 690 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 ARHGEF18Q6ZSZ5 1173 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 GIMAP4Q9NUV9 329 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
TPR-201ENST00000367478 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 CBX8Q9HC52 389 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 IVNS1ABPQ9Y6Y0 642 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 KCNK3O14649 394 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 IFNA8P32881 189 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 TYW5A2RUC4 315 aaKnown RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 NME9Q86XW9 330 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 MAP7D3Q8IWC1 876 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 TRIM11Q96F44 468 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 TNNI1P19237 187 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 BBS5Q8N3I7 341 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 SATB2Q9UPW6 733 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 EFCAB14O75071 495 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 ABCD1P33897 745 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
TPR-201ENST00000367478 IQCB1Q15051 598 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 POMGNT1Q8WZA1 660 aa13.6□□□□□ -0.23
TPR-201ENST00000367478 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 KCNA4P22459 653 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 EEF1B2P24534 225 aaKnown RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 PDE6CP51160 858 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 SNX29Q8TEQ0 813 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 KRT10P13645 584 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 ADCY7P51828 1080 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 SP4Q02446 784 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 ANKRD35Q8N283 1001 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 CHMP2AO43633 222 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 CHMLP26374 656 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 GUCY2FP51841 1108 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 HAUS4Q9H6D7 363 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 MID2Q9UJV3 735 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPR-201ENST00000367478 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 VPS41P49754 854 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 MTX1Q13505 466 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 METTL14Q9HCE5 456 aaKnown RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 BPIFB4P59827 614 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 AOC3Q16853 763 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 SBNO2Q9Y2G9 1366 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 NOP14P78316 857 aaKnown RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 LCA5Q86VQ0 697 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 PCYT1AP49585 367 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 ATG16L1Q676U5 607 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
TPR-201ENST00000367478 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.59□□□□□ -0.23
TPR-201ENST00000367478 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.58□□□□□ -0.23
TPR-201ENST00000367478 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.23
TPR-201ENST00000367478 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.23
TPR-201ENST00000367478 MRPL40Q9NQ50 206 aaKnown RBP13.58□□□□□ -0.23
TPR-201ENST00000367478 LRWD1Q9UFC0 647 aa13.58□□□□□ -0.23
TPR-201ENST00000367478 SLC13A4Q9UKG4 626 aa13.58□□□□□ -0.23
TPR-201ENST00000367478 COPG1Q9Y678 874 aaKnown RBP13.58□□□□□ -0.23
TPR-201ENST00000367478 TAF11Q15544 211 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.58□□□□□ -0.245e-6■■■■■ 37.8
TPR-201ENST00000367478 USP26Q9BXU7 913 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 A0A1B0GW55 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 KRT19P08727 400 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L2P0CJ85 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L3P0CJ86 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L4P0CJ87 422 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L5P0CJ88 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L6P0CJ89 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4L7P0CJ90 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 ARHGDIAP52565 204 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 DUX4Q9UBX2 424 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 MAP3K1Q13233 1512 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 GSTA4O15217 222 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 TMED1Q13445 227 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 SNX1Q13596 522 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 MAGEF1Q9HAY2 307 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
TPR-201ENST00000367478 ABCC5O15440 1437 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
TPR-201ENST00000367478 SLC5A4Q9NY91 659 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms