RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 ASPRV1Q53RT3 343 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
NEK2-201ENST00000366998 ARFGEF1Q9Y6D6 1849 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 TNIP1Q15025 636 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
NEK2-201ENST00000366998 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
NEK2-201ENST00000366998 VAT1LQ9HCJ6 419 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
NEK2-201ENST00000366998 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
NEK2-201ENST00000366998 GDF11O95390 407 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 CCDC192P0DO97 292 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
NEK2-201ENST00000366998 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
NEK2-201ENST00000366998 EARS2Q5JPH6 523 aaKnown RBP17.19■□□□□ 0.34
NEK2-201ENST00000366998 TATDN1Q6P1N9 297 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 ANP32BQ92688 251 aaKnown RBP17.19■□□□□ 0.34
NEK2-201ENST00000366998 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 CEP131Q9UPN4 1083 aa17.19■□□□□ 0.34
NEK2-201ENST00000366998 MYO1BO43795 1136 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 NDUFA8P51970 172 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 CCDC96Q2M329 555 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 ABCB5Q2M3G0 1257 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 MTMR14Q8NCE2 650 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 TNFRSF25Q93038 417 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 FUCA2Q9BTY2 467 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 TRIM75PA6NK02 468 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 STXBP3O00186 592 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 RAD21O60216 631 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 CUTAO60888 179 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 CMA1P23946 247 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 SEPT2Q15019 361 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
NEK2-201ENST00000366998 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
NEK2-201ENST00000366998 BLIDQ8IZY5 108 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
NEK2-201ENST00000366998 KANSL2Q9H9L4 492 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
NEK2-201ENST00000366998 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.18■□□□□ 0.34
NEK2-201ENST00000366998 BARHL2Q9NY43 387 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
NEK2-201ENST00000366998 CTAGE5O15320 804 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
NEK2-201ENST00000366998 NAPAP54920 295 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 ICA1Q05084 483 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
NEK2-201ENST00000366998 TYW1BQ6NUM6 668 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
NEK2-201ENST00000366998 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 KRI1Q8N9T8 703 aaKnown RBP17.17■□□□□ 0.34
NEK2-201ENST00000366998 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 PIGSQ96S52 555 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
NEK2-201ENST00000366998 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 PFKFB1P16118 471 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 TYRO3Q06418 890 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 HERC5Q9UII4 1024 aaKnown RBP17.16■□□□□ 0.34
NEK2-201ENST00000366998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
NEK2-201ENST00000366998 ADAMTS3O15072 1205 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 TTC38Q5R3I4 469 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
NEK2-201ENST00000366998 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
NEK2-201ENST00000366998 WNT10BO00744 389 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 GH2P01242 217 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
NEK2-201ENST00000366998 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 GJA3Q9Y6H8 435 aa17.15■□□□□ 0.34
NEK2-201ENST00000366998 ZNF202O95125 648 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
NEK2-201ENST00000366998 RESP18Q5W5W9 173 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
NEK2-201ENST00000366998 RASGRP4Q8TDF6 673 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 ZBED3Q96IU2 234 aaPredicted RBP17.14■□□□□ 0.33
NEK2-201ENST00000366998 TMEM39BQ9GZU3 492 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 FBXO2Q9UK22 296 aaPredicted RBP17.14■□□□□ 0.33
NEK2-201ENST00000366998 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 BMP15O95972 392 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 PTPREP23469 700 aa17.14■□□□□ 0.33
NEK2-201ENST00000366998 SYKP43405 635 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms