RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
ATF3-206ENST00000366987 HOXD10P28358 340 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 PRKAR2BP31323 418 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
ATF3-206ENST00000366987 MRPS35P82673 323 aaKnown RBP11.28□□□□□ -0.6
ATF3-206ENST00000366987 FAAH2Q6GMR7 532 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 WDR93Q6P2C0 686 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 KLHDC4Q8TBB5 520 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 TAF4BQ92750 862 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 MAML3Q96JK9 1138 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
ATF3-206ENST00000366987 PALM3A6NDB9 673 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 PRC1O43663 620 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 SYF2O95926 243 aaKnown RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.6
ATF3-206ENST00000366987 SMARCA1P28370 1054 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 HSPA4P34932 840 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 PARP10Q53GL7 1025 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 ZFYVE27Q5T4F4 411 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 NCCRP1Q6ZVX7 275 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 ZNF653Q96CK0 615 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.69e-6■■■■■ 27.7
ATF3-206ENST00000366987 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 KAT14Q9H8E8 782 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 GALNT8Q9NY28 637 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.6
ATF3-206ENST00000366987 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.6
ATF3-206ENST00000366987 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.27□□□□□ -0.6
ATF3-206ENST00000366987 N6AMT1Q9Y5N5 214 aa11.27□□□□□ -0.6
ATF3-206ENST00000366987 RGS12O14924 1447 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 NDUFAB1O14561 156 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 TRIM37O94972 964 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 IL2RBP14784 551 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 KIF5BP33176 963 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 CCT8P50990 548 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 CCNG1P51959 295 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 CHMP4BP1P59074 171 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 ARPC4P59998 168 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
ATF3-206ENST00000366987 CBX3Q13185 183 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 NBPF14Q5TI25 921 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 BARGINQ6ZT62 677 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 IGSF22Q8N9C0 903 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 TEKT4Q8WW24 435 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 SH3GL2Q99962 352 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 VCX3BQ9H321 246 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 GOLPH3LQ9H4A5 285 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 VCX3AQ9NNX9 186 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.61
ATF3-206ENST00000366987 TTLL3Q9Y4R7 772 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 DISP2A7MBM2 1401 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 GLI3P10071 1580 aa11.27□□□□□ -0.61
ATF3-206ENST00000366987 MEGF6O75095 1541 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 BIRC5O15392 142 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 MARCH6O60337 910 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 MTRF1O75570 445 aaKnown RBP11.26□□□□□ -0.61
ATF3-206ENST00000366987 CAPN15O75808 1086 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
ATF3-206ENST00000366987 PDHBP11177 359 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
ATF3-206ENST00000366987 OXCT1P55809 520 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 RCN1Q15293 331 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 CNGA3Q16281 694 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 INAQ16352 499 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 THOC7Q6I9Y2 204 aaKnown RBP11.26□□□□□ -0.61
ATF3-206ENST00000366987 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
ATF3-206ENST00000366987 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 SMC6Q96SB8 1091 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 ABCB6Q9NP58 842 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATF3-206ENST00000366987 DLG5Q8TDM6 1919 aa11.26□□□□□ -0.61
ATF3-206ENST00000366987 GNAI3P08754 354 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 NAT2P11245 290 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 LACTB2Q53H82 288 aaPredicted RBP11.25□□□□□ -0.61
ATF3-206ENST00000366987 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 ATF7IPQ6VMQ6 1270 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
ATF3-206ENST00000366987 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
ATF3-206ENST00000366987 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms