RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ZSCAN26Q16670 478 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 PSD3Q9NYI0 1048 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
PRKN-204ENST00000366896 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 ZNF804BA4D1E1 1349 aa16.71■□□□□ 0.26
PRKN-204ENST00000366896 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
PRKN-204ENST00000366896 STX10O60499 249 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 BCAMP50895 628 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 MORC3Q14149 939 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 WTAPQ15007 396 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
PRKN-204ENST00000366896 RABGGTAQ92696 567 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 CCDC34Q96HJ3 373 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 WDR24Q96S15 920 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 SERTAD1Q9UHV2 236 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 CD2APQ9Y5K6 639 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
PRKN-204ENST00000366896 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 PARD6BQ9BYG5 372 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
PRKN-204ENST00000366896 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
PRKN-204ENST00000366896 GNG11P61952 73 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 FAM177A1Q8N128 213 aaPredicted RBP16.69■□□□□ 0.26
PRKN-204ENST00000366896 PDILTQ8N807 584 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 NUP133Q8WUM0 1156 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
PRKN-204ENST00000366896 ANAPC4Q9UJX5 808 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 IRS2Q9Y4H2 1338 aa16.69■□□□□ 0.26
PRKN-204ENST00000366896 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
PRKN-204ENST00000366896 ERICH2A1L162 156 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 KLRK1P26718 216 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 JAKMIP3Q5VZ66 844 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 MED15Q96RN5 788 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 RNF26Q9BY78 433 aaPredicted RBP16.68■□□□□ 0.26
PRKN-204ENST00000366896 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 SPECC1LQ69YQ0 1117 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 GOLGA5Q8TBA6 731 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 BAG1Q99933 345 aaPredicted RBP16.68■□□□□ 0.26
PRKN-204ENST00000366896 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
PRKN-204ENST00000366896 FAM205CA6NFA0 338 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 ADGRA1Q86SQ6 560 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
PRKN-204ENST00000366896 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 ADAM21Q9UKJ8 722 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 CCDC151A5D8V7 595 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 ACTN4O43707 911 aaKnown RBP16.67■□□□□ 0.26
PRKN-204ENST00000366896 UFL1O94874 794 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 BMP15O95972 392 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 RASSF4Q9H2L5 321 aa16.67■□□□□ 0.26
PRKN-204ENST00000366896 IQSEC3Q9UPP2 1182 aaPredicted RBP16.67■□□□□ 0.26
PRKN-204ENST00000366896 MAP2K7O14733 419 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 GYG1P46976 350 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 LONRF2Q1L5Z9 754 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
PRKN-204ENST00000366896 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 TMX4Q9H1E5 349 aaPredicted RBP16.66■□□□□ 0.26
PRKN-204ENST00000366896 AATFQ9NY61 560 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRKN-204ENST00000366896 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 TXLNAP40222 546 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
PRKN-204ENST00000366896 TXNRD3Q86VQ6 643 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 SNED1Q8TER0 1413 aa16.66■□□□□ 0.26
PRKN-204ENST00000366896 H3BQF6 201 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 MYO1CO00159 1063 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 SOCS7O14512 581 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 PLCD1P51178 756 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 ADKP55263 362 aaKnown RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 PPARAQ07869 468 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 BRD3Q15059 726 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 TOGARAM2Q6ZUX3 1019 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 DHX58Q96C10 678 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 GPR101Q96P66 508 aaPredicted RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 LRP2BPQ9P2M1 347 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 PCP11498 1178 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms