RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 N4BP3O15049 544 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 WHAMMP3Q1A5X7 153 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 MCTP2Q6DN12 878 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 FAM76AQ8TAV0 307 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 SECISBP2LQ93073 1101 aaKnown RBP22.1■■□□□ 1.13
TRIM58-201ENST00000366481 DEXIO95424 95 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
TRIM58-201ENST00000366481 SETQ01105 290 aaPredicted RBP22.1■■□□□ 1.13
TRIM58-201ENST00000366481 FBXW10Q5XX13 1052 aa22.1■■□□□ 1.13
TRIM58-201ENST00000366481 ZNF512BQ96KM6 892 aaPredicted RBP22.1■■□□□ 1.13
TRIM58-201ENST00000366481 CD44P16070 742 aaKnown RBP22.09■■□□□ 1.13
TRIM58-201ENST00000366481 KLRK1P26718 216 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 FKBP15Q5T1M5 1219 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 ANKRD20A12PQ8NF67 263 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 VPS16Q9H269 839 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 HDAC6Q9UBN7 1215 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 TTF2Q9UNY4 1162 aaKnown RBP22.09■■□□□ 1.13
TRIM58-201ENST00000366481 SRGAP2O75044 1071 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 NR1I3Q14994 352 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 EEF2KMTQ96G04 330 aa22.09■■□□□ 1.13
TRIM58-201ENST00000366481 SHTN1A0MZ66 631 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 TUBB4BP68371 445 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 RILPL1Q5EBL4 403 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 TEX2Q8IWB9 1127 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 ENAHQ8N8S7 591 aaPredicted RBP22.08■■□□□ 1.13
TRIM58-201ENST00000366481 CTCFLQ8NI51 663 aaPredicted RBP22.08■■□□□ 1.13
TRIM58-201ENST00000366481 BCAS4Q8TDM0 211 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 SYMPKQ92797 1274 aaKnown RBP22.08■■□□□ 1.13
TRIM58-201ENST00000366481 MAGEB6P1A0A0J9YX57 407 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 GOLGA6CA6NDK9 693 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 GOLGA6DP0CG33 693 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 STAG1Q8WVM7 1258 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 WASF1Q92558 559 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 FAM107BQ9H098 131 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 GOLGA6AQ9NYA3 693 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 SAMM50Q9Y512 469 aa22.08■■□□□ 1.13
TRIM58-201ENST00000366481 MAP2K2P36507 400 aa22.08■■□□□ 1.12
TRIM58-201ENST00000366481 GGCXP38435 758 aa22.08■■□□□ 1.12
TRIM58-201ENST00000366481 IL6STP40189 918 aaPredicted RBP22.08■■□□□ 1.12
TRIM58-201ENST00000366481 ALX1Q15699 326 aa22.08■■□□□ 1.12
TRIM58-201ENST00000366481 CNGA4Q8IV77 575 aa22.08■■□□□ 1.12
TRIM58-201ENST00000366481 DCCP43146 1447 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 RPS6KA5O75582 802 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 NAA15Q9BXJ9 866 aaKnown RBP22.07■■□□□ 1.12
TRIM58-201ENST00000366481 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 ACTN4O43707 911 aaKnown RBP22.07■■□□□ 1.12
TRIM58-201ENST00000366481 FXR1P51114 621 aaKnown RBP eCLIP22.07■■□□□ 1.12
TRIM58-201ENST00000366481 TUBB2AQ13885 445 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 CCDC152Q4G0S7 254 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 IFIT1BQ5T764 474 aaKnown RBP22.07■■□□□ 1.12
TRIM58-201ENST00000366481 TUBB2BQ9BVA1 445 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 TRIM10Q9UDY6 481 aa22.07■■□□□ 1.12
TRIM58-201ENST00000366481 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
TRIM58-201ENST00000366481 PLIN2Q99541 437 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 FAM169AQ9Y6X4 670 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 TRIM75PA6NK02 468 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 MFAP3LO75121 409 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 TUBBP07437 444 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 CYP2D6P10635 497 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 ZNF18P17022 549 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 ITPK1Q13572 414 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 TSR1Q2NL82 804 aaKnown RBP22.06■■□□□ 1.12
TRIM58-201ENST00000366481 USP17L12C9JPN9 530 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 USP17L21D6R901 530 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 EHD4Q9H223 541 aa22.06■■□□□ 1.12
TRIM58-201ENST00000366481 SYNRGQ9UMZ2 1314 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 INPP5BP32019 993 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 FOXP1Q9H334 677 aaPredicted RBP22.05■■□□□ 1.12
TRIM58-201ENST00000366481 KCNQ2O43526 872 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 MCM7P33993 719 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 MATR3P43243 847 aaKnown RBP eCLIP22.05■■□□□ 1.125e-7■■■■□ 21.9
TRIM58-201ENST00000366481 PLCD1P51178 756 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 MORC3Q14149 939 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 ESR2Q92731 530 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
TRIM58-201ENST00000366481 AATFQ9NY61 560 aaKnown RBP eCLIP22.05■■□□□ 1.12
TRIM58-201ENST00000366481 KRT9P35527 623 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 PKN1Q16512 942 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 RASGRP4Q8TDF6 673 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 RUFY1Q96T51 708 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 KAT14Q9H8E8 782 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 SRPRBQ9Y5M8 271 aaKnown RBP22.04■■□□□ 1.12
TRIM58-201ENST00000366481 UBR2Q8IWV8 1755 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 BCL9O00512 1426 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 USP8P40818 1118 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 PIK3AP1Q6ZUJ8 805 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 RASGRP2Q7LDG7 609 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 TFR2Q9UP52 801 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 C4AP0C0L4 1744 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 C4BP0C0L5 1744 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 ATRNO75882 1429 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 SLIT2O94813 1529 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 A0A1B0GTH6 734 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 GOLGA6BA6NDN3 693 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 KIAA0754O94854 1291 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 SYF2O95926 243 aaKnown RBP22.04■■□□□ 1.12
TRIM58-201ENST00000366481 DPYDQ12882 1025 aa22.04■■□□□ 1.12
TRIM58-201ENST00000366481 KIAA1328Q86T90 577 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms