RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 RFX1P22670 979 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 NTF4P34130 210 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 MAPKAPK2P49137 400 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF200P98182 395 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 TEKQ02763 1124 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PTH1RQ03431 593 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 MAPK7Q13164 816 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 CBX2Q14781 532 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 R3HDM1Q15032 1099 aaKnown RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PLEKHN1Q494U1 663 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 NRN1LQ496H8 165 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAM26FQ5R3K3 315 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PAPD7Q5XG87 772 aaKnown RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 MAP1SQ66K74 1059 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 SYCE2Q6PIF2 218 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 RNF111Q6ZNA4 994 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 UBE3DQ7Z6J8 389 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 SULF2Q8IWU5 870 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 ADAMTS17Q8TE56 1095 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 ELMO3Q96BJ8 720 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 MAP6Q96JE9 813 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PRRX2Q99811 253 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 SSBP3Q9BWW4 388 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 DUSP15Q9H1R2 295 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 EHD4Q9H223 541 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 RTN4Q9NQC3 1192 aaKnown RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PTGFRNQ9P2B2 879 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 GPN3Q9UHW5 284 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 MAFBQ9Y5Q3 323 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 SALL3Q9BXA9 1300 aa1.09□□□□□ -2.24
RNU6-54P-201ENST00000365563 IRS2Q9Y4H2 1338 aa1.09□□□□□ -2.24
RNU6-54P-201ENST00000365563 MROH6A6NGR9 719 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 A6NHS1 94 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 WTIPA6NIX2 430 aaPredicted RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 DCDC2CA8MYV0 355 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 MASP2O00187 686 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 SMARCA5O60264 1052 aaPredicted RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRMT3O60678 531 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 RAMP2O60895 175 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ENDOUP21128 410 aaKnown RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 BMP5P22003 454 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 RTP1P59025 263 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 DAB2P98082 770 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 GRM2Q14416 872 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 NAA30Q147X3 362 aaPredicted RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRKD1Q15139 912 aaPredicted RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 LSM12Q3MHD2 195 aaKnown RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 RGL3Q3MIN7 710 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 NOM1Q5C9Z4 860 aaKnown RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 KIAA0319Q5VV43 1072 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ALKBH2Q6NS38 261 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 RPTNQ6XPR3 784 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 PDZD3Q86UT5 571 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ATCAYQ86WG3 371 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 LDLRAD3Q86YD5 345 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 GALNT12Q8IXK2 581 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 IL27Q8NEV9 243 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 DNERQ8NFT8 737 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 GPBAR1Q8TDU6 330 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF503Q96F45 646 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ARXQ96QS3 562 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 AGAP2Q99490 1192 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 MKNK1Q9BUB5 465 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 VRTNQ9H8Y1 702 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZFYVE28Q9HCC9 887 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 TMEM39AQ9NV64 488 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 FOXD3Q9UJU5 478 aaPredicted RBP1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 TRAK1Q9UPV9 953 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 SAMM50Q9Y512 469 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 DMRT1Q9Y5R6 373 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 CSADQ9Y600 493 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 TACC3Q9Y6A5 838 aa1.08□□□□□ -2.24
RNU6-54P-201ENST00000365563 SSU72P8A0A1W2PR75 194 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRAMEF27A3QJZ7 478 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 NOTOA8MTQ0 251 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 WASH4PA8MWX3 477 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 NARSO43776 548 aaKnown RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 RAD21O60216 631 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 TRIM37O94972 964 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 CST3P01034 146 aaPredicted RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 NEFLP07196 543 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 NCAM1P13591 858 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 MAKP20794 623 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 NME2P22392 152 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 ARNTP27540 789 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 RPL10P27635 214 aaKnown RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 CD38P28907 300 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF157P51786 506 aaPredicted RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 C21orf58P58505 322 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 ETF1P62495 437 aaKnown RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 CYP4F8P98187 520 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 RING1Q06587 406 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 DLX2Q07687 328 aaPredicted RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 FAM69CQ0P6D2 419 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 FAAP100Q0VG06 881 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 PDE3BQ13370 1112 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 SLBPQ14493 270 aaKnown RBP eCLIP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 CLEC16AQ2KHT3 1053 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 HDGFL1Q5TGJ6 251 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 SCARA3Q6AZY7 606 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms