RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CCNFP41002 786 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 HK2P52789 917 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 ERVFC1P60507 584 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 RNF4P78317 190 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 RBBP8NLQ8NC74 664 aaPredicted RBP7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 ALPK1Q96QP1 1244 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.21
RNU4-28P-201ENST00000364739 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 EIF6P56537 245 aaKnown RBP7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 TTC6Q86TZ1 520 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 PPFIBP1Q86W92 1011 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 CPLX3Q8WVH0 158 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 TM9SF2Q99805 663 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 ASCC2Q9H1I8 757 aaPredicted RBP7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 SUCOQ9UBS9 1254 aaKnown RBP7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 FBXL21Q9UKT6 434 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 LTBP3Q9NS15 1303 aa7.51□□□□□ -1.21
RNU4-28P-201ENST00000364739 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 COL9A2Q14055 689 aaPredicted RBP7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 CCDC144CPQ8IYA2 1237 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 HDAC8Q9BY41 377 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 PCDHB10Q9UN67 800 aa7.5□□□□□ -1.21
RNU4-28P-201ENST00000364739 BIN1O00499 593 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 C8AP07357 584 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 GIPRP48546 466 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 AUHQ13825 339 aaKnown RBP7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 PPP2R5EQ16537 467 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 AXDND1Q5T1B0 1012 aaPredicted RBP7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 DCAF15Q66K64 600 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 TCTN2Q96GX1 697 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 SHDQ96IW2 340 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 DHRS1Q96LJ7 313 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 SPATA32Q96LK8 384 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 FOXP3Q9BZS1 431 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 EBF1Q9UH73 591 aa7.49□□□□□ -1.21
RNU4-28P-201ENST00000364739 TRHRP34981 398 aaPredicted RBP7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 GDNFP39905 211 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 FAM169BQ8N8A8 192 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 FLAD1Q8NFF5 587 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 FAM168AQ92567 244 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 TMEM59LQ9UK28 342 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 MRVI1Q9Y6F6 885 aa7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
RNU4-28P-201ENST00000364739 E9PSI1 815 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 SHOXO15266 292 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 FKTNO75072 461 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 ATF4P18848 351 aaPredicted RBP7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 PMS1P54277 932 aaKnown RBP7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 TEKQ02763 1124 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 TAB3Q8N5C8 712 aaPredicted RBP7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 SEC16BQ96JE7 1060 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 C19orf44Q9H6X5 657 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 CHST7Q9NS84 486 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 PCDHB12Q9Y5F1 795 aa7.47□□□□□ -1.21
RNU4-28P-201ENST00000364739 A0A1W2PQH9 124 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 SIGLEC6O43699 453 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZGLP1P0C6A0 271 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 RPL10P27635 214 aaKnown RBP7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 C7orf61Q8IZ16 206 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 DAGLBQ8NCG7 672 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 ENOX1Q8TC92 643 aaKnown RBP7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 BRF1Q92994 677 aa7.46□□□□□ -1.22
RNU4-28P-201ENST00000364739 SYPP08247 313 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 CTSKP43235 329 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 AFMP43652 599 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 GNPTABQ3T906 1256 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF655Q8N720 491 aaPredicted RBP7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 LIN37Q96GY3 246 aaPredicted RBP7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 TCFL5Q9UL49 500 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF214Q9UL59 606 aaPredicted RBP7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF451Q9Y4E5 1061 aa7.45□□□□□ -1.22
RNU4-28P-201ENST00000364739 SSU72P8A0A1W2PR75 194 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF503-AS2A6NEH8 195 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 TIGD5Q53EQ6 642 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 WAPLQ7Z5K2 1190 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZSWIM9Q86XI8 627 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
RNU4-28P-201ENST00000364739 TMEM82A0PJX8 343 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 GALK1P51570 392 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 PCBP3P57721 371 aaKnown RBP7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZNF445P59923 1031 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 BBS9Q3SYG4 887 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 NOL9Q5SY16 702 aaKnown RBP7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 CRTC3Q6UUV7 619 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 DSCC1Q9BVC3 393 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 SP110Q9HB58 689 aa7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.43□□□□□ -1.22
RNU4-28P-201ENST00000364739 ZMYM5Q9UJ78 669 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms