RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 LIG3P49916 1009 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 SEPT6Q14141 434 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 ZNF655Q8N720 491 aaPredicted RBP4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 LINC00116Q8NCU8 138 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 FAM13CQ8NE31 585 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 VWCEQ96DN2 955 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 CCDC74BQ96LY2 380 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 ASB16Q96NS5 453 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 TNFRSF10DQ9UBN6 386 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 PALD1Q9ULE6 856 aa4.61□□□□□ -1.67
RNU6-238P-201ENST00000363313 PLCG1P19174 1290 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 EIF4BP23588 611 aaKnown RBP4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 GNA15P30679 374 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 ARL4AP40617 200 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 EPHB3P54753 998 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 CBX2Q14781 532 aaPredicted RBP4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 GALNT18Q6P9A2 607 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 LDHDQ86WU2 507 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 USHBP1Q8N6Y0 703 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 NOC4LQ9BVI4 516 aaKnown RBP4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 KRTAP9-8Q9BYQ0 159 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 ZMYM5Q9UJ78 669 aa4.6□□□□□ -1.67
RNU6-238P-201ENST00000363313 WTIPA6NIX2 430 aaPredicted RBP4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 LRRN2O75325 713 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 RPL10P27635 214 aaKnown RBP4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 TNNI2P48788 182 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 CDR1P51861 262 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 PCBP3P57721 371 aaKnown RBP4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 IGDCC3Q8IVU1 814 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 ZDHHC14Q8IZN3 488 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 GPR20Q99678 358 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 C1orf115Q9H7X2 142 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 IRS2Q9Y4H2 1338 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 AK5Q9Y6K8 562 aa4.59□□□□□ -1.67
RNU6-238P-201ENST00000363313 SHISA3A0PJX4 238 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 UPK3BL1B0FP48 263 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 UPK3BL2E5RIL1 263 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 TFE3P19532 575 aaPredicted RBP4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 KCNC1P48547 511 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 RNF4P78317 190 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 NMIQ13287 307 aaPredicted RBP4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 HHIPL2Q6UWX4 724 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 CEP128Q6ZU80 1094 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 WAPLQ7Z5K2 1190 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 SIRT2Q8IXJ6 389 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 TP53I13Q8NBR0 393 aaPredicted RBP4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 HHIPL1Q96JK4 782 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 PWWP2AQ96N64 755 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 HDAC8Q9BY41 377 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 KLHL14Q9P2G3 628 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 PCDHA5Q9Y5H7 936 aa4.58□□□□□ -1.68
RNU6-238P-201ENST00000363313 SSU72P8A0A1W2PR75 194 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 TMEM82A0PJX8 343 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 INSRRP14616 1297 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 RTP1P59025 263 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 TCTN2Q96GX1 697 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 FCRL2Q96LA5 508 aaPredicted RBP4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 TCFL5Q9UL49 500 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 WWC3Q9ULE0 1092 aa4.57□□□□□ -1.68
RNU6-238P-201ENST00000363313 A0A1W2PQ45 241 aaPredicted RBP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 A0A1W2PQY0 241 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 FADS2P1A8MWK0 482 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 K7ESM1 405 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 USP2O75604 605 aaPredicted RBP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 BPNT1O95861 308 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 EFEMP2O95967 443 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 CHMP4BP1P59074 171 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 PUM1Q14671 1186 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 NR1I3Q14994 352 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 TARBP2Q15633 366 aaKnown RBP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 ZNF827Q17R98 1081 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 SYT8Q8NBV8 401 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 EAF1Q96JC9 268 aaPredicted RBP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 SETDB2Q96T68 719 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 BDH2Q9BUT1 245 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 CORINQ9Y5Q5 1042 aa4.56□□□□□ -1.68
RNU6-238P-201ENST00000363313 FAM221AA4D161 298 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 C1QTNF3-AMACRE9PGA6 284 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 RBAK-RBAKDNI3L0D1 243 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 RGS13O14921 159 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 BUB1BO60566 1050 aaPredicted RBP4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 BRD1O95696 1058 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 LDHBP07195 334 aaKnown RBP4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 PFKLP17858 780 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 IGFBP6P24592 240 aaPredicted RBP4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 MAGEA10P43363 369 aaPredicted RBP4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 ST13P50502 369 aaKnown RBP4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 GALK1P51570 392 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 SLURP1P55000 103 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 RAD51AP2Q09MP3 1159 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 MLECQ14165 292 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 RTP5Q14D33 572 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 VMACQ2NL98 169 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 GATAD2BQ8WXI9 593 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 FOXP3Q9BZS1 431 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 ADAM7Q9H2U9 754 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 ACSL6Q9UKU0 697 aa4.55□□□□□ -1.68
RNU6-238P-201ENST00000363313 FFAR3O14843 346 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 PRPF40AO75400 957 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms