RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 DEXIO95424 95 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 SHMT1P34896 483 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 CEBPZQ03701 1054 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 TNFAIP1Q13829 316 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 GTPBP4Q9BZE4 634 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 RBM28Q9NW13 759 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 MYH8P13535 1937 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 DDAH1O94760 285 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 POTEJP0CG39 1038 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 MAP3K11Q16584 847 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 SHROOM1Q2M3G4 852 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 TEPSINQ96N21 525 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 CLSTN2Q9H4D0 955 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 PGAP2Q9UHJ9 254 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 SCN4AP35499 1836 aa15.94■□□□□ 0.14
CSNK1E-201ENST00000359867 WDR90Q96KV7 1748 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.144e-7■■■□□ 16.5
CSNK1E-201ENST00000359867 TFAP4Q01664 338 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 LINC00301Q8NCQ3 95 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 EHD4Q9H223 541 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 GJB4Q9NTQ9 266 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 IQCA1LA6NCM1 817 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 CCDC178Q5BJE1 867 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 RBM43Q6ZSC3 357 aaKnown RBP15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 ZNF444Q8N0Y2 327 aaPredicted RBP15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 TRIM34Q9BYJ4 488 aa15.93■□□□□ 0.14
CSNK1E-201ENST00000359867 FTOQ9C0B1 505 aaKnown RBP eCLIP15.93■□□□□ 0.144e-9■■□□□ 11.5
CSNK1E-201ENST00000359867 CCDC192P0DO97 292 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 CAMK4Q16566 473 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 NBPF12Q5TAG4 269 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 ADALQ6DHV7 355 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 APOBEC3FQ8IUX4 373 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 TNMDQ9H2S6 317 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 RRAGCQ9HB90 399 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 FZD1Q9UP38 647 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 A0A1W2PQ27 194 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 A0A1W2PQ64 194 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 A0A1W2PQD8 194 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 ADM5C9JUS6 153 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 TSPY3P0CV98 308 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 TSPY8P0CW00 308 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 AKR1B1P15121 316 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 USP50Q70EL3 339 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 MYRIPQ8NFW9 859 aa15.92■□□□□ 0.14
CSNK1E-201ENST00000359867 NR1I2O75469 434 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 ME1P48163 572 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 TROAPQ12815 778 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 GNL2Q13823 731 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 STK38Q15208 465 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.91■□□□□ 0.146e-12■■■■■ 78.7
CSNK1E-201ENST00000359867 ZNF287Q9HBT7 754 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 SWAP70Q9UH65 585 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 GDF11O95390 407 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 RRP1BQ14684 758 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 SAFBQ15424 915 aaKnown RBP eCLIP15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 FOXP4Q8IVH2 680 aaPredicted RBP15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
CSNK1E-201ENST00000359867 CTAGE5O15320 804 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 MMP1P03956 469 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 IL17RBQ9NRM6 502 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 PYCARDQ9ULZ3 195 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 PCDHA7Q9UN72 937 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 SPTLC2O15270 562 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 AKAP17AQ02040 695 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 SF3A1Q15459 793 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 METTL16Q86W50 562 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 KCNF1Q9H3M0 494 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 TCP11L1Q9NUJ3 509 aa15.9■□□□□ 0.14
CSNK1E-201ENST00000359867 JAG1P78504 1218 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 KRT26Q7Z3Y9 468 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 XBP1P17861 261 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 FAM160A1Q05DH4 1040 aa15.89■□□□□ 0.13
CSNK1E-201ENST00000359867 FUT2Q10981 343 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms