RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
UBAP1-202ENST00000359544 CABS1Q96KC9 395 aa16.78■□□□□ 0.28
UBAP1-202ENST00000359544 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
UBAP1-202ENST00000359544 ABHD10Q9NUJ1 306 aa16.78■□□□□ 0.28
UBAP1-202ENST00000359544 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
UBAP1-202ENST00000359544 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
UBAP1-202ENST00000359544 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
UBAP1-202ENST00000359544 ERVK-24P63145 666 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
UBAP1-202ENST00000359544 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
UBAP1-202ENST00000359544 STAG1Q8WVM7 1258 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 SUFUQ9UMX1 484 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 SAR1BQ9Y6B6 198 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 AGPSO00116 658 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 PTPREP23469 700 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 DDR1Q08345 913 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 IQCEQ6IPM2 695 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 CCDC70Q6NSX1 233 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
UBAP1-202ENST00000359544 HMGB2P26583 209 aaKnown RBP16.76■□□□□ 0.27
UBAP1-202ENST00000359544 STK11IPQ8N1F8 1099 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 HAUS4Q9H6D7 363 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 ANGEL1Q9UNK9 670 aaKnown RBP16.76■□□□□ 0.27
UBAP1-202ENST00000359544 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 ABL1P00519 1130 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-202ENST00000359544 GNGT1P63211 74 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 OSBP2Q969R2 916 aa16.76■□□□□ 0.27
UBAP1-202ENST00000359544 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
UBAP1-202ENST00000359544 ZNF213O14771 459 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 ACTN4O43707 911 aaKnown RBP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 OPA1O60313 960 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 CCNI2Q6ZMN8 369 aaPredicted RBP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 XAGE3Q8WTP9 111 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 RUBCNQ92622 972 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 FAM184BQ9ULE4 1060 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 GRIN2DO15399 1336 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 FGAP02671 866 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 NFIXQ14938 502 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 HLFQ16534 295 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 PAPD7Q5XG87 772 aaKnown RBP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 NOSTRINQ8IVI9 506 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
UBAP1-202ENST00000359544 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
UBAP1-202ENST00000359544 H0YHG0 523 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 CUL4BQ13620 913 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBAP1-202ENST00000359544 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 AMOTL1Q8IY63 956 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 GUCA1BQ9UMX6 200 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 FSBPO95073 299 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 GRAMD1CQ8IYS0 662 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 GIMAP7Q8NHV1 300 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 WASF1Q92558 559 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 NBPF3Q9H094 633 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 CEP131Q9UPN4 1083 aa16.74■□□□□ 0.27
UBAP1-202ENST00000359544 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
UBAP1-202ENST00000359544 STK36Q9NRP7 1315 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 MICALCLQ6ZW33 695 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 OTUD6BQ8N6M0 293 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 SH3GL2Q99962 352 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 NDUFA10O95299 355 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 SKOR1P84550 965 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 SPAG1Q07617 926 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 PHKBQ93100 1093 aa16.73■□□□□ 0.27
UBAP1-202ENST00000359544 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
UBAP1-202ENST00000359544 FOXP2O15409 715 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 C21orf2O43822 256 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 STX17P56962 302 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 AENQ8WTP8 325 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 LIMA1Q9UHB6 759 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 MYH8P13535 1937 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 SH2B2O14492 632 aaPredicted RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 N4BP3O15049 544 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
UBAP1-202ENST00000359544 GPTP24298 496 aa16.72■□□□□ 0.27
UBAP1-202ENST00000359544 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms