RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 SLURP2P0DP57 97 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 ADORA1P30542 326 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 MAGEA10P43363 369 aaPredicted RBP7.81□□□□□ -1.16
CCDC196-201ENST00000359454 GSTO1P78417 241 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 RASGRF1Q13972 1273 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 LIAT1Q6ZQX7 453 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 TRMT44Q8IYL2 757 aaKnown RBP7.81□□□□□ -1.16
CCDC196-201ENST00000359454 TDHQ8IZJ6 230 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 COPRSQ9NQ92 184 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.81□□□□□ -1.16
CCDC196-201ENST00000359454 MORF4L1Q9UBU8 362 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 OGDHLQ9ULD0 1010 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 GPSM3Q9Y4H4 160 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 PTPRFP10586 1907 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 MYH2Q9UKX2 1941 aa7.81□□□□□ -1.16
CCDC196-201ENST00000359454 COL2A1P02458 1487 aaPredicted RBP7.81□□□□□ -1.16
CCDC196-201ENST00000359454 ZNF521Q96K83 1311 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 ALPK3Q96L96 1907 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 CENPFP49454 3210 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 USP17L5A8MUK1 530 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 E9PSI1 815 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 CD2BP2O95400 341 aaKnown RBP7.8□□□□□ -1.16
CCDC196-201ENST00000359454 FBXO45P0C2W1 286 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 SYN1P17600 705 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 CAP2P40123 477 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 SLC19A1P41440 591 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 HMGCS2P54868 508 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 RHBDL3P58872 404 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 MECOMQ03112 1051 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 NR1H3Q13133 447 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 MVPQ14764 893 aaKnown RBP7.8□□□□□ -1.16
CCDC196-201ENST00000359454 AGERQ15109 404 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 ALDH1L2Q3SY69 923 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 MAP3K21Q5TCX8 1036 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 TRIB2Q92519 343 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 ARHGAP9Q9BRR9 750 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 UBE2OQ9C0C9 1292 aaKnown RBP7.8□□□□□ -1.16
CCDC196-201ENST00000359454 ASCC2Q9H1I8 757 aaPredicted RBP7.8□□□□□ -1.16
CCDC196-201ENST00000359454 MTMR10Q9NXD2 777 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 AKAP2Q9Y2D5 859 aa7.8□□□□□ -1.16
CCDC196-201ENST00000359454 LOC285556D6RIA3 1793 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 BRCA2P51587 3418 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 DDX60LQ5H9U9 1706 aaKnown RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 FAM196BA6NMK8 535 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 CYP2B6P20813 491 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 HOXA7P31268 230 aaPredicted RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 WNT7BP56706 349 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 TIMM10P62072 90 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 SH3BP2P78314 561 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 IRX3P78415 501 aaPredicted RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 Q7L0L9 218 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 BPHLQ86WA6 291 aaPredicted RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 SOCS4Q8WXH5 440 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 FOXJ1Q92949 421 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 EMID1Q96A84 441 aaPredicted RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 XAGE2Q96GT9 111 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 TMOD4Q9NZQ9 345 aa7.79□□□□□ -1.16
CCDC196-201ENST00000359454 HERC5Q9UII4 1024 aaKnown RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 PA2G4Q9UQ80 394 aaKnown RBP7.79□□□□□ -1.16
CCDC196-201ENST00000359454 MAGEB6P1A0A0J9YX57 407 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 A0A1B0GUL7 405 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 COL6A1P12109 1028 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 ZKSCAN1P17029 563 aaPredicted RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 MAPK4P31152 587 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 BACE1P56817 501 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 PDE3AQ14432 1141 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 RRP1BQ14684 758 aaKnown RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 TEX11Q8IYF3 940 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 ZNF384Q8TF68 577 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 GTF3C2Q8WUA4 911 aaPredicted RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 NSUN4Q96CB9 384 aaKnown RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 P2RX7Q99572 595 aaKnown RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 DHX36Q9H2U1 1008 aaKnown RBP7.78□□□□□ -1.16
CCDC196-201ENST00000359454 SMC4Q9NTJ3 1288 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 GINM1Q9NU53 330 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 HMG20BQ9P0W2 317 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 PI4KBQ9UBF8 816 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 DOCK3Q8IZD9 2030 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 PFASO15067 1338 aa7.78□□□□□ -1.16
CCDC196-201ENST00000359454 ASNSP08243 561 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 RGS2P41220 211 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 HERVK_113P62684 666 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 SKOR1P84550 965 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.17
CCDC196-201ENST00000359454 SLFN5Q08AF3 891 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 TFCP2Q12800 502 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 FAM109BQ6ICB4 259 aaPredicted RBP7.77□□□□□ -1.17
CCDC196-201ENST00000359454 SH3RF1Q7Z6J0 888 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 ZBTB33Q86T24 672 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 CCAR1Q8IX12 1150 aaKnown RBP7.77□□□□□ -1.17
CCDC196-201ENST00000359454 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms