RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 PALLDQ8WX93 1383 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 GRM8O00222 908 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 PES1O00541 588 aaKnown RBP14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 KRT83P78385 493 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 KRT40Q6A162 431 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 SPAG5Q96R06 1193 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 STIM2Q9P246 746 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 RIPOR2Q9Y4F9 1068 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
SPTSSB-201ENST00000359175 HMGB1P1B2RPK0 211 aaPredicted RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 OPLAHO14841 1288 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 CDC25AP30304 524 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 ITGB3BPQ13352 177 aaPredicted RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 ATP6V1G3Q96LB4 118 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 ALG1Q9BT22 464 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 SEC31BQ9NQW1 1179 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 SH2B2O14492 632 aaPredicted RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 GHRP10912 638 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 ELF3P78545 371 aaPredicted RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 CWF19L2Q2TBE0 894 aaKnown RBP14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 CFAP58Q5T655 872 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 KSR2Q6VAB6 950 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 HINFPQ9BQA5 517 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 C15orf41Q9Y2V0 281 aa14.85□□□□□ -0.03
SPTSSB-201ENST00000359175 GMNCA6NCL1 334 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 N4BP3O15049 544 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 MST1RQ04912 1400 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 TNNI3KQ59H18 835 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 GRAMD1CQ8IYS0 662 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 PURBQ96QR8 312 aaKnown RBP14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 JADE2Q9NQC1 790 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 CORO1CQ9ULV4 474 aaPredicted RBP14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 FPGT-TNNI3KV9GXZ4 949 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 BUB1BO60566 1050 aaPredicted RBP14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 COQ9O75208 318 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 IDEP14735 1019 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 STX17P56962 302 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 KRT31Q15323 416 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 DDX46Q7L014 1031 aaKnown RBP14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 MREGQ8N565 214 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
SPTSSB-201ENST00000359175 ERICH2A1L162 156 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 C5orf60A6NFR6 353 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 LIN7AO14910 233 aaPredicted RBP14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 FESP07332 822 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 PRLRP16471 622 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 PTPREP23469 700 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 PSMD2Q13200 908 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 RIPK1Q13546 671 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 ARFGAP2Q8N6H7 521 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 CCHCR1Q8TD31 782 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 ACSBG1Q96GR2 724 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 NUP58Q9BVL2 599 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 KDM4CQ9H3R0 1056 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 SNX12Q9UMY4 172 aa14.83□□□□□ -0.03
SPTSSB-201ENST00000359175 SLIT1O75093 1534 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 ANXA1P04083 346 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 CCT6AP40227 531 aaKnown RBP14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 THEMIS2Q5TEJ8 643 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 KLHL10Q6JEL2 608 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 ARMC9Q7Z3E5 817 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 DNAJC7Q99615 494 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 FBXO2Q9UK22 296 aaPredicted RBP14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 AHCYL1O43865 530 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 ZMYM1Q5SVZ6 1142 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 HAUS3Q68CZ6 603 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 LINS1Q8NG48 757 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 STAMBPL1Q96FJ0 436 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 CCDC43Q96MW1 224 aaKnown RBP14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 POLD4Q9HCU8 107 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 DBF4Q9UBU7 674 aaPredicted RBP14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 LEMD3Q9Y2U8 911 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 KDM3BQ7LBC6 1761 aa14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 MYO5AQ9Y4I1 1855 aaKnown RBP14.83□□□□□ -0.04
SPTSSB-201ENST00000359175 PPP1R3GB7ZBB8 358 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 VAV2P52735 878 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 MYO1EQ12965 1108 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 KLHL23Q8NBE8 558 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 PIK3R5Q8WYR1 880 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 SEC16BQ96JE7 1060 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 PPANQ9NQ55 473 aaKnown RBP14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 BCL9LQ86UU0 1499 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 TRAPPC3O43617 180 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 PRC1O43663 620 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 RTN3O95197 1032 aaPredicted RBP14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 COPB1P53618 953 aaKnown RBP14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 SLC7A5Q01650 507 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 SPAG1Q07617 926 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 MSL1Q68DK7 614 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 CCT6BQ92526 530 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 TBC1D31Q96DN5 1066 aa14.82□□□□□ -0.04
SPTSSB-201ENST00000359175 PAIP2Q9BPZ3 127 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms