RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 SESTD1Q86VW0 696 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 GNGT2O14610 69 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ADCY7P51828 1080 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 PIP4K2CQ8TBX8 421 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 FAN1Q9Y2M0 1017 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
COL11A1-202ENST00000358392 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ARHGAP45Q92619 1136 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 UFL1O94874 794 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 LRRD1A4D1F6 860 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 CAPN9O14815 690 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 TAF5LO75529 589 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 ATL3Q6DD88 541 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 LRRC8CQ8TDW0 803 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 PPWD1Q96BP3 646 aaKnown RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 AZI2Q9H6S1 392 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 KCNJ18B7U540 433 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 KCNJ12Q14500 433 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 FAM47AQ5JRC9 791 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 MYCBPQ99417 103 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 METTL14Q9HCE5 456 aaKnown RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 HAUS2Q9NVX0 235 aa12.29□□□□□ -0.44
COL11A1-202ENST00000358392 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
COL11A1-202ENST00000358392 SEC31AO94979 1220 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 IFT88Q13099 833 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ZBTB41Q5SVQ8 909 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 OLA1Q9NTK5 396 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ZMYND10O75800 440 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 CNGA1P29973 690 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 PDCD2Q16342 344 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 RMDN2Q96LZ7 410 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ANGEL1Q9UNK9 670 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ATF2P15336 505 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 MORC3Q14149 939 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ZKSCAN8Q15776 578 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 PTPN21Q16825 1174 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 MYLK4Q86YV6 388 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 SCHIP1Q9P0W5 487 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 GPAA1O43292 621 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 TTC4O95801 387 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 ITGA6P23229 1130 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
COL11A1-202ENST00000358392 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 DENND2AQ9ULE3 1009 aa12.28□□□□□ -0.44
COL11A1-202ENST00000358392 TECP42680 631 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.44
COL11A1-202ENST00000358392 KRT82Q9NSB4 513 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 KDRP35968 1356 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 SART1O43290 800 aaKnown RBP12.27□□□□□ -0.44
COL11A1-202ENST00000358392 SNX1Q13596 522 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.44
COL11A1-202ENST00000358392 EEF1B2P24534 225 aaKnown RBP12.27□□□□□ -0.45
COL11A1-202ENST00000358392 GOLGA8FQ08AF8 430 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 GOLGA8DPQ0D2H9 430 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 POLE2P56282 527 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
COL11A1-202ENST00000358392 SLC8A1P32418 973 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 TMEM259Q4ZIN3 620 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 SH2D4AQ9H788 454 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 HOMER3Q9NSC5 361 aa12.27□□□□□ -0.45
COL11A1-202ENST00000358392 SGK1O00141 431 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 DLATP10515 647 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 DNM2P50570 870 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 GPBP1Q86WP2 473 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 GRK7Q8WTQ7 553 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 M0QZ92 97 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms