RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 FSBPO95073 299 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 PPP1R7Q15435 360 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
CNOT3-202ENST00000358389 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
CNOT3-202ENST00000358389 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 ZIM3Q96PE6 472 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 EHD2Q9NZN4 543 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 TTMPQ5BVD1 217 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 ZNF594Q96JF6 807 aaPredicted RBP12.76□□□□□ -0.37
CNOT3-202ENST00000358389 EPN3Q9H201 632 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 PPP1R37O75864 691 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 SMTNP53814 917 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 NELFBQ8WX92 580 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 ZKSCAN3Q9BRR0 538 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 GUCY2DQ02846 1103 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 PAK1Q13153 545 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 TRIM14Q14142 442 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 RILPL1Q5EBL4 403 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNOT3-202ENST00000358389 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 EIF4E1BA6NMX2 242 aaKnown RBP12.75□□□□□ -0.37
CNOT3-202ENST00000358389 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 PSMD14O00487 310 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 AKR1B10O60218 316 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 CLTAP09496 248 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 PTPREP23469 700 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 HSPA2P54652 639 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 HIBCHQ6NVY1 386 aaPredicted RBP12.75□□□□□ -0.37
CNOT3-202ENST00000358389 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 TCP11Q8WWU5 503 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 WASF1Q92558 559 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
CNOT3-202ENST00000358389 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
CNOT3-202ENST00000358389 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 LACRTQ9GZZ8 138 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 NAPBQ9H115 298 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 SPATS2LQ9NUQ6 558 aaKnown RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 DDX20Q9UHI6 824 aaKnown RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 EPS15P42566 896 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 ANTXR2P58335 489 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 MDM2Q00987 491 aaPredicted RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 DDR1Q08345 913 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 ALS2CLQ60I27 953 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 CCDC50Q8IVM0 306 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 SGSM3Q96HU1 749 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 hCG_1642624A0A1W2PR95 340 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 FNTAP49354 379 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 ZNF174Q15697 407 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 ALS2CR12Q96Q35 445 aa12.74□□□□□ -0.37
CNOT3-202ENST00000358389 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 CPSF2Q9P2I0 782 aaKnown RBP12.74□□□□□ -0.37
CNOT3-202ENST00000358389 GPAA1O43292 621 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 KIF4AO95239 1232 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 ERCC3P19447 782 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 MB21D2Q8IYB1 491 aaPredicted RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 STIM2Q9P246 746 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 SLC8A1P32418 973 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 CRYMQ14894 314 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 ENOX2Q16206 610 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 NFRKBQ6P4R8 1299 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 PTGISQ16647 500 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 AGLP35573 1532 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 MOCS3O95396 460 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 CDC25CP30307 473 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 EMBQ6PCB8 327 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms